RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 TRBV12-3P01733 135 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 HLA-DQB1P01920 261 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 MT-ND4P03905 459 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 PRKACAP17612 351 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 TCP1P17987 556 aaKnown RBP1.91□□□□□ -2.1
CCDC7-216ENST00000640058 IL1RNP18510 177 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 CXCR1P25024 350 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 GGT2P36268 569 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 EIF1P41567 113 aaKnown RBP1.91□□□□□ -2.1
CCDC7-216ENST00000640058 PRLHRP49683 370 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 TSC22D1Q15714 1073 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 FAM222AQ5U5X8 452 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 STEAP4Q687X5 459 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 OR2T5Q6IEZ7 315 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 CD300LGQ6UXG3 332 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 TMPRSS11AQ6ZMR5 421 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 NDUFAF7Q7L592 441 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 ZNF101Q8IZC7 436 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 SLC35G3Q8N808 338 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 FAM184AQ8NB25 1140 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 ST20-AS1Q8NBB2 130 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 TMEM104Q8NE00 496 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 OR5T1Q8NG75 326 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 OR13G1Q8NGZ3 307 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 OR2T29Q8NH02 315 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 RCN3Q96D15 328 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 TVP23CQ96ET8 276 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 KCNS3Q9BQ31 491 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 BCL7BQ9BQE9 202 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 EMC6Q9BV81 110 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 KRTAP4-1Q9BYQ7 146 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 NAA50Q9GZZ1 169 aaKnown RBP1.91□□□□□ -2.1
CCDC7-216ENST00000640058 OR51B5Q9H339 312 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 RBFOX1Q9NWB1 397 aaKnown RBP1.91□□□□□ -2.1
CCDC7-216ENST00000640058 RHBDL2Q9NX52 303 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 ENOPH1Q9UHY7 261 aa1.91□□□□□ -2.1
CCDC7-216ENST00000640058 THADAQ6YHU6 1953 aa1.9□□□□□ -2.1
CCDC7-216ENST00000640058 ADGRL1O94910 1474 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 SCN4AP35499 1836 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 CCL15-CCL14A0A0B4J2E2 113 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 PSPHP1O15172 72 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 CHMP2AO43633 222 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 PLIN3O60664 434 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 CRYGCP07315 174 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 PMCHP20382 165 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 PCK1P35558 622 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 CSKP41240 450 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 IFITM3Q01628 133 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 RPL18AQ02543 176 aaKnown RBP1.9□□□□□ -2.11
CCDC7-216ENST00000640058 CCL15Q16663 113 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 HADHQ16836 314 aaKnown RBP1.9□□□□□ -2.11
CCDC7-216ENST00000640058 SLC25A35Q3KQZ1 300 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 YIF1BQ5BJH7 314 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 TMEM236Q5W0B7 351 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 KDM4DQ6B0I6 523 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 GUSBP11Q6P575 273 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 ASCL4Q6XD76 172 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 SLC35D2Q76EJ3 337 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 VTCN1Q7Z7D3 282 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 ZNF645Q8N7E2 425 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 PIH1D2Q8WWB5 315 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 BAALCQ8WXS3 180 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 GHSRQ92847 366 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 RDH12Q96NR8 316 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 OR4K3Q96R72 315 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 ANP32EQ9BTT0 268 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 ZSCAN16Q9H4T2 348 aaPredicted RBP1.9□□□□□ -2.11
CCDC7-216ENST00000640058 CHRAC1Q9NRG0 131 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 SIGLEC7Q9Y286 467 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 TMEM131Q92545 1883 aa1.9□□□□□ -2.11
CCDC7-216ENST00000640058 SIGLEC1Q9BZZ2 1709 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 ARPC4-TTLL3A0A0A6YYG9 625 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 IGHV1-3A0A0C4DH29 117 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 A0A1W2PNN7 141 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 HACD1B0YJ81 288 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 ZNF701M0R085 212 aaPredicted RBP1.89□□□□□ -2.11
CCDC7-216ENST00000640058 SLC19A2O60779 497 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 TGM6O95932 706 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 OTCP00480 354 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 LHBP01229 141 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 YWHAEP62258 255 aaKnown RBP1.89□□□□□ -2.11
CCDC7-216ENST00000640058 C6orf99Q4VX62 202 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 OPN5Q6U736 354 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 OR2W3Q7Z3T1 314 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 ERO1BQ86YB8 467 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 DRAM1Q8N682 238 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 ZNF321PQ8N8H1 164 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 OR8D1Q8WZ84 308 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 CPNE4Q96A23 557 aaPredicted RBP1.89□□□□□ -2.11
CCDC7-216ENST00000640058 FBXO44Q9H4M3 255 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 FBXO8Q9NRD0 319 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 C21orf62Q9NYP8 219 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 VAX2Q9UIW0 290 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 CES1P1Q9UKY3 287 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 DDX19BQ9UMR2 479 aa1.89□□□□□ -2.11
CCDC7-216ENST00000640058 NLRC5Q86WI3 1866 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 MYO16Q9Y6X6 1858 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 A0A0J9YYE9 177 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 A0A1W2PRF3 423 aa1.88□□□□□ -2.11
CCDC7-216ENST00000640058 A0A1W2PRM7 423 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms