RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	FAM25C	B3EWG5	89 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	FAM25G	B3EWG6	89 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	ELK1	P19419	428 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	PTAFR	P25105	342 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	CD40	P25942	277 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	PTBP1	P26599	531 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	UQCRFS1	P47985	274 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	FUT6	P51993	359 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	PRSS12	P56730	875 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	CLDN12	P56749	244 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	SORD	Q00796	357 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	PRDX4	Q13162	271 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	P2RY14	Q15391	338 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	KISS1	Q15726	138 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	UBE2NL	Q5JXB2	153 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	SPATA46	Q5T0L3	261 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	OR2T2	Q6IF00	324 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	XKRX	Q6PP77	449 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	METAP1D	Q6UB28	335 aa	Predicted RBP	10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	LRRC28	Q86X40	367 aa	Predicted RBP	10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	WFDC8	Q8IUA0	241 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	OR51D1	Q8NGF3	324 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	LGALS14	Q8TCE9	139 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	KLF14	Q8TD94	323 aa	Predicted RBP	10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	UBASH3B	Q8TF42	649 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	ZFAND2B	Q8WV99	257 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	BBC3	Q96PG8	261 aa	Predicted RBP	10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	GPER1	Q99527	375 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	CNTD2	Q9H8S5	307 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	CYSLTR2	Q9NS75	346 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	MPC1	Q9Y5U8	109 aa		10.11	□□□□□ -0.79
CLN6-223	ENST00000637823	LOC100289279	A0A1B0GTE1	492 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	FABP12	A6NFH5	140 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	IQCF6	A8MYZ5	107 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	BPNT1	O95861	308 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	ARSB	P15848	533 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	CD40LG	P29965	261 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	GCH1	P30793	250 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	GLRX	P35754	106 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	ART1	P52961	327 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	PPP5C	P53041	499 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	ATP1B3	P54709	279 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	ERVS71-1	P61550	626 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	RPS23	P62266	143 aa	Known RBP	10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	PSG7	Q13046	419 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	CEACAM21	Q3KPI0	293 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	MBNL2	Q5VZF2	373 aa	Known RBP	10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	PLCXD3	Q63HM9	321 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	CNIH2	Q6PI25	160 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	LHFPL2	Q6ZUX7	228 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	ANGPTL5	Q86XS5	388 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	PNLDC1	Q8NA58	520 aa	Known RBP	10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	OR5A2	Q8NGI9	324 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	OR4D6	Q8NGJ1	314 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	RAB40A	Q8WXH6	277 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	ZC3HAV1L	Q96H79	300 aa	Known RBP	10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	SPACA5	Q96QH8	159 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	HIST1H2AA	Q96QV6	131 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	SOST	Q9BQB4	213 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	PAPOLG	Q9BWT3	736 aa	Known RBP	10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	ABCG5	Q9H222	651 aa		10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	MRPL15	Q9P015	296 aa	Known RBP	10.1	□□□□□ -0.79
CLN6-223	ENST00000637823	CFAP46	Q8IYW2	2715 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	FAM230A	A0A1W2PPH8	454 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	DPRX	A6NFQ7	191 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	EIF4E	P06730	217 aa	Known RBP	10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	UBB	P0CG47	229 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	ZNF250	P15622	560 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	KITLG	P21583	273 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	TALDO1	P37837	337 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	MPV17	P39210	176 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	PEX19	P40855	299 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	PTGFR	P43088	359 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	ALDH3B1	P43353	468 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	POU3F4	P49335	361 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	RBP2	P50120	134 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	MTCP1	P56278	107 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	NKX6-1	P78426	367 aa	Predicted RBP	10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	SNTB2	Q13425	540 aa	Known RBP	10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	RGS7BP	Q6MZT1	257 aa	Predicted RBP	10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	FAM131A	Q6UXB0	335 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	RNF144B	Q7Z419	303 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	ZDHHC23	Q8IYP9	409 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	CMTM4	Q8IZR5	234 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	ZNF843	Q8N446	348 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	NPRL2	Q8WTW4	380 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	BORCS5	Q969J3	196 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	PTX4	Q96A99	478 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	BORCS8	Q96FH0	119 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	S100A16	Q96FQ6	103 aa	Known RBP	10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	RADIL	Q96JH8	1075 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	PPP1R3E	Q9H7J1	279 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	RABL2A	Q9UBK7	228 aa	Predicted RBP	10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	GHRL	Q9UBU3	117 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	FBLN5	Q9UBX5	448 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	GPR160	Q9UJ42	338 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	PURG	Q9UJV8	347 aa	Known RBP	10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	RAB22A	Q9UL26	194 aa		10.09	□□□□□ -0.79
CLN6-223	ENST00000637823	RABL2B	Q9UNT1	228 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms