RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 DCBLD2Q96PD2 775 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 SIGLEC12Q96PQ1 595 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 GFI1Q99684 422 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 TCEAL7Q9BRU2 100 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 MRPL13Q9BYD1 178 aaKnown RBP10.17□□□□□ -0.78
CLN6-217ENST00000636964 STARD10Q9Y365 291 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 FXYD6-FXYD2A0A087WZ82 144 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 TMEM272A0A1B0GTI8 110 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 AQP7P3A6NL99 342 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 C21orf140B9A014 251 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 SULT1C2O00338 296 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 PHYHO14832 338 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 SLC25A17O43808 307 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 F12P00748 615 aaPredicted RBP10.17□□□□□ -0.78
CLN6-217ENST00000636964 MICBQ29980 383 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 ZNF674Q2M3X9 581 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 Q499Y3 187 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 KCTD18Q6PI47 426 aaPredicted RBP10.17□□□□□ -0.78
CLN6-217ENST00000636964 DND1Q8IYX4 353 aaKnown RBP10.17□□□□□ -0.78
CLN6-217ENST00000636964 CMTM4Q8IZR5 234 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 LRRC18Q8N456 261 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 SLC25A44Q96H78 314 aaPredicted RBP10.17□□□□□ -0.78
CLN6-217ENST00000636964 NKX3-1Q99801 234 aaPredicted RBP10.17□□□□□ -0.78
CLN6-217ENST00000636964 C7orf50Q9BRJ6 194 aaKnown RBP10.17□□□□□ -0.78
CLN6-217ENST00000636964 COMMD4Q9H0A8 199 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 FXYD6Q9H0Q3 95 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 NOX3Q9HBY0 568 aa10.17□□□□□ -0.78
CLN6-217ENST00000636964 SVILO95425 2214 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 ZNF726A6NNF4 738 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 HMSDA8MTL9 139 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 IGHG1P01857 330 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 MAS1P04201 325 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 CD1AP06126 327 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 FTH1P19P0C7X4 201 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 PGA4P0DJD7 388 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 PGA3P0DJD8 388 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 AKR1C2P52895 323 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 AKR1C1Q04828 323 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 ABHD17BQ5VST6 288 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 ELP2Q6IA86 826 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 PIP4P1Q86T03 277 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 OR10K1Q8NGX5 313 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 OR52N5Q8NH56 324 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 TMEM106AQ96A25 262 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 FOXRED1Q96CU9 486 aaPredicted RBP10.16□□□□□ -0.78
CLN6-217ENST00000636964 MISP3Q96FF7 219 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 C4orf45Q96LM5 186 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 ZNF385AQ96PM9 386 aaKnown RBP10.16□□□□□ -0.78
CLN6-217ENST00000636964 PIGQQ9BRB3 760 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 EMC9Q9Y3B6 208 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 DCHS1Q96JQ0 3298 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 LRRC3CA6NJW4 275 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 OR2AT4A6NND4 320 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 ZNF35P13682 527 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 JMJD6Q6NYC1 403 aaPredicted RBP10.16□□□□□ -0.78
CLN6-217ENST00000636964 GLB1L2Q8IW92 636 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 ST7LQ8TDW4 575 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 RNF128Q8TEB7 428 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 ASB17Q8WXJ9 295 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 NKD1Q969G9 470 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 NTNG2Q96CW9 530 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 SRXN1Q9BYN0 137 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 TCF7L1Q9HCS4 588 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 CAMK2AQ9UQM7 478 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 GOLT1BQ9Y3E0 138 aa10.16□□□□□ -0.78
CLN6-217ENST00000636964 TRAV8-7A0A075B6U6 113 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 PRAF2O60831 178 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 GDF1P27539 372 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 SNRPEP62304 92 aaKnown RBP10.15□□□□□ -0.78
CLN6-217ENST00000636964 TCF15Q12870 199 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 NOXO1Q8NFA2 376 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 LGALS14Q8TCE9 139 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 TSEN15Q8WW01 171 aaKnown RBP10.15□□□□□ -0.78
CLN6-217ENST00000636964 MCHR2Q969V1 340 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 NPIPB13A6NJU9 1138 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 NPIPB4C9JG80 1138 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 CTDSPLO15194 276 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 MUC1P15941 1255 aaPredicted RBP10.15□□□□□ -0.78
CLN6-217ENST00000636964 DCTDP32321 178 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 B3GALT5-AS1P59052 145 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 H3F3AP84243 136 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 STAC2Q6ZMT1 411 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 REC114Q7Z4M0 266 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 SERPINA12Q8IW75 414 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 ADAMTS17Q8TE56 1095 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 RASL12Q9NYN1 266 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 POLR1DQ9Y2S0 133 aa10.15□□□□□ -0.78
CLN6-217ENST00000636964 TMEM212A6NML5 194 aa10.15□□□□□ -0.79
CLN6-217ENST00000636964 PMS2P2O95744 297 aa10.15□□□□□ -0.79
CLN6-217ENST00000636964 ADRA2CP18825 462 aa10.15□□□□□ -0.79
CLN6-217ENST00000636964 C4BPBP20851 252 aa10.15□□□□□ -0.79
CLN6-217ENST00000636964 ROM1Q03395 351 aa10.15□□□□□ -0.79
CLN6-217ENST00000636964 FOXO1Q12778 655 aa10.15□□□□□ -0.79
CLN6-217ENST00000636964 SRSF6Q13247 344 aaKnown RBP10.15□□□□□ -0.79
CLN6-217ENST00000636964 ELFN2Q5R3F8 820 aa10.15□□□□□ -0.79
CLN6-217ENST00000636964 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.15□□□□□ -0.79
CLN6-217ENST00000636964 GPR148Q8TDV2 347 aa10.15□□□□□ -0.79
CLN6-217ENST00000636964 GLYATL2Q8WU03 294 aa10.15□□□□□ -0.79
CLN6-217ENST00000636964 SLC25A38Q96DW6 304 aa10.15□□□□□ -0.79
CLN6-217ENST00000636964 PLEKHA1Q9HB21 404 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms