RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 S100A13Q99584 98 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 UCK1Q9HA47 277 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 LRP3O75074 770 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 NPBWR1P48145 328 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 RAET1LQ5VY80 246 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 ZDHHC22Q8N966 263 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 EDAQ92838 391 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 MLXQ9UH92 298 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 LSM5Q9Y4Y9 91 aaKnown RBP12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 WIF1Q9Y5W5 379 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 A0A0A6YYH2 397 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 FAM230AA0A1W2PPH8 454 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 A6NJ64 397 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 GUCA1AP43080 201 aaPredicted RBP12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 FXYD4P59646 89 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 ZNF345Q14585 488 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 UBE2V2Q15819 145 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 CHRFAM7AQ494W8 412 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 DEGS2Q6QHC5 323 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 PLPP5Q8NEB5 264 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 OR4A4PQ8NGN8 299 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 RTBDNQ9BSG5 229 aaPredicted RBP12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 OR10A2Q9H208 303 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 GPR173Q9NS66 373 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 GPR132Q9UNW8 380 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 FLVCR1Q9Y5Y0 555 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 MTCH2Q9Y6C9 303 aa12.35□□□□□ -0.43
CACNA1A-228ENST00000636610 TPT1P13693 172 aaKnown RBP12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 ACY1Q03154 408 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 TAF9Q16594 264 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 LYZL4Q96KX0 146 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 CDC6Q99741 560 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 UQCC2Q9BRT2 126 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 SLC2A8Q9NY64 477 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 GLS2Q9UI32 602 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 PIGLQ9Y2B2 252 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 MAP1BP46821 2468 aaKnown RBP12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 HPNP05981 417 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 TMEM225BP0DP42 221 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 ASCL1P50553 236 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 SCRN3Q0VDG4 424 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 ZP4Q12836 540 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 RHBDD2Q6NTF9 364 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 WDSUB1Q8N9V3 476 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 RASL10BQ96S79 203 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 PIGMQ9H3S5 423 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 PLEK2Q9NYT0 353 aa12.34□□□□□ -0.43
CACNA1A-228ENST00000636610 A0A1W2PQM1 296 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 CCL7P80098 99 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 PLXDC2Q6UX71 529 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 CPEB2Q7Z5Q1 589 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 C5orf24Q7Z6I8 188 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 EIF4E3Q8N5X7 224 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 REEP6Q96HR9 211 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 CYTL1Q9NRR1 136 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 OCIAD1Q9NX40 245 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 MCTS1Q9ULC4 181 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 TEX13DA0A0J9YY54 714 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 DHRS7CA6NNS2 312 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 H7C2Y5 167 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 SRFP11831 508 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 PTGDSP41222 190 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 PTGFRP43088 359 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 DCDP81605 110 aaKnown RBP12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 AADACL3Q5VUY0 350 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 PTX4Q96A99 478 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 DNTTIP1Q9H147 329 aa12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 ZNF629Q9UEG4 869 aaPredicted RBP12.33□□□□□ -0.44
CACNA1A-228ENST00000636610 MED6O75586 246 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 SFT2D2O95562 160 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 PVALBP20472 110 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 NOVA1P51513 510 aaKnown RBP12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 AFF3P51826 1226 aaKnown RBP12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 CCDC157Q569K6 752 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 DTWD2Q8NBA8 298 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 ZNF2Q9BSG1 426 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 FAAP24Q9BTP7 215 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 PNRC2Q9NPJ4 139 aaKnown RBP12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 PLEKHJ1Q9NW61 149 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 XRCC2O43543 280 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 SNAPC5O75971 98 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 ZFAND5O76080 213 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 IGHV3-9P01782 118 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 IAH1Q2TAA2 248 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 MISPQ8IVT2 679 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 CCDC36Q8IYA8 594 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 OR56B1Q8NGI3 324 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 URM1Q9BTM9 101 aaKnown RBP12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 MYOZ1Q9NP98 299 aaPredicted RBP12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 COL4A2P08572 1712 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 CCDC163A0A0D9SF12 145 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 DIRAS3O95661 229 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 P2RY4P51582 365 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 TGIF1Q15583 401 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 SNAI3Q3KNW1 292 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 MRGPRX4Q96LA9 322 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 GPHA2Q96T91 129 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 CMSS1Q9BQ75 279 aaKnown RBP12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 RAB33BQ9H082 229 aa12.32□□□□□ -0.44
CACNA1A-228ENST00000636610 RARRES3Q9UL19 164 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms