RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 RNF212BA8MTL3 300 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 A8MXK9 166 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 ENTPD6O75354 484 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 ZNF154Q13106 437 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 OCLNQ16625 522 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 SLC25A30Q5SVS4 291 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 BTNL3Q6UXE8 466 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 FAM220AQ7Z4H9 259 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 LRRC29Q8WV35 223 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 OR5P3Q8WZ94 311 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 MBOAT4Q96T53 435 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 MDFIQ99750 246 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 MMP26Q9NRE1 261 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 ERVK-18Q9QC07 812 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 ENPP5Q9UJA9 477 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 PIGLQ9Y2B2 252 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 ATRQ13535 2644 aa13.12□□□□□ -0.31
LINC00339-207ENST00000634712 TRAPPC2LH3BP13 241 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 CDIPTO14735 213 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 TCF21O43680 179 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 MPZL2O60487 215 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 SULT1C4O75897 302 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 AVPP01185 164 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 TTRP02766 147 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 CSNK2BP67870 215 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 ZSCAN26Q16670 478 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 MICBQ29980 383 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 LYPD2Q6UXB3 125 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 MOB3CQ70IA8 216 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 SSX6Q7RTT6 188 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 C1QL2Q7Z5L3 287 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 WDR86Q86TI4 376 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 C11orf53Q8IXP5 236 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 ELMOD2Q8IZ81 293 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 GCSAMQ8N6F7 178 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 ZNF555Q8NEP9 628 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 RNFT2Q96EX2 444 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 Q96MT0 163 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 ADI1Q9BV57 179 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 PCDHGB1Q9Y5G3 927 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 INSIG2Q9Y5U4 225 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 AUP1Q9Y679 476 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 CUBNO60494 3623 aa13.11□□□□□ -0.31
LINC00339-207ENST00000634712 MXRA5Q9NR99 2828 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 LOC100130705A0A1B0GUX0 176 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 DAPL1A0PJW8 107 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 P2RY10O00398 339 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 ADAM20O43506 726 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 SRSF10O75494 262 aaKnown RBP13.1□□□□□ -0.31
LINC00339-207ENST00000634712 DHRS3O75911 302 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 LHBP01229 141 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 GYPAP02724 150 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 ZNF12P17014 697 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 ADRA2CP18825 462 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 NPY4RP50391 375 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 GPM6AP51674 278 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 ACTC1P68032 377 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 ACTA1P68133 377 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 HOXA4Q00056 320 aaPredicted RBP13.1□□□□□ -0.31
LINC00339-207ENST00000634712 CEACAM21Q3KPI0 293 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 CEP78Q5JTW2 689 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 ZBTB37Q5TC79 503 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 WDR82Q6UXN9 313 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 C1orf229Q6ZS94 237 aaPredicted RBP13.1□□□□□ -0.31
LINC00339-207ENST00000634712 RAB40AQ8WXH6 277 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 RPL3LQ92901 407 aaKnown RBP13.1□□□□□ -0.31
LINC00339-207ENST00000634712 TECTBQ96PL2 329 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 MYCBPQ99417 103 aaPredicted RBP13.1□□□□□ -0.31
LINC00339-207ENST00000634712 GNG8Q9UK08 70 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 DOCK11Q5JSL3 2073 aa13.1□□□□□ -0.31
LINC00339-207ENST00000634712 IGHV3OR15-7A0A075B7D8 119 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 A0A1B0GVI7 797 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 ZNF732B4DXR9 585 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 NRASP01111 189 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 IGLV3-1P01715 115 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 MUC1P15941 1255 aaPredicted RBP13.09□□□□□ -0.31
LINC00339-207ENST00000634712 FAHP16930 419 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 EPHA1P21709 976 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 GNG3P63215 75 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 ODF4Q2M2E3 257 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 ARMCX4Q5H9R4 360 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 ZNF684Q5T5D7 378 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 CD276Q5ZPR3 534 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 PLCXD3Q63HM9 321 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 WDR25Q64LD2 544 aaPredicted RBP13.09□□□□□ -0.31
LINC00339-207ENST00000634712 DOK3Q7L591 496 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 KCTD20Q7Z5Y7 419 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 SCCPDHQ8NBX0 429 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 OR5A2Q8NGI9 324 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 ZNF418Q8TF45 676 aaPredicted RBP13.09□□□□□ -0.31
LINC00339-207ENST00000634712 MRPL48Q96GC5 212 aaKnown RBP13.09□□□□□ -0.31
LINC00339-207ENST00000634712 TLNRD1Q9H1K6 362 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 FAM118AQ9NWS6 357 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 DNAJB11Q9UBS4 358 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 SLC22A13Q9Y226 551 aa13.09□□□□□ -0.31
LINC00339-207ENST00000634712 E9PQ18 207 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 EGR1P18146 543 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 FPR2P25090 351 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 CFHR2P36980 270 aa13.08□□□□□ -0.31
LINC00339-207ENST00000634712 PSMB10P40306 273 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms