RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 SEC16AO15027 2179 aa10.57□□□□□ -0.72
SHPRH-211ENST00000629427 PPM1DO15297 605 aa10.57□□□□□ -0.72
SHPRH-211ENST00000629427 MT-CO3P00414 261 aa10.57□□□□□ -0.72
SHPRH-211ENST00000629427 LALBAP00709 142 aa10.57□□□□□ -0.72
SHPRH-211ENST00000629427 CEACAM6P40199 344 aa10.57□□□□□ -0.72
SHPRH-211ENST00000629427 ERVFC1-1P60608 527 aa10.57□□□□□ -0.72
SHPRH-211ENST00000629427 OR2F1Q13607 317 aa10.57□□□□□ -0.72
SHPRH-211ENST00000629427 TMEM108Q6UXF1 575 aa10.57□□□□□ -0.72
SHPRH-211ENST00000629427 OR2G2Q8NGZ5 317 aa10.57□□□□□ -0.72
SHPRH-211ENST00000629427 RAB1BQ9H0U4 201 aa10.57□□□□□ -0.72
SHPRH-211ENST00000629427 OR51I2Q9H344 312 aa10.57□□□□□ -0.72
SHPRH-211ENST00000629427 PPIL1Q9Y3C6 166 aa10.57□□□□□ -0.72
SHPRH-211ENST00000629427 IFITM5A6NNB3 132 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 M0R1X1 148 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 LYZL6O75951 148 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 GNG3P63215 75 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 KIAA0141Q14154 515 aaPredicted RBP10.56□□□□□ -0.72
SHPRH-211ENST00000629427 CTU2Q2VPK5 515 aaKnown RBP10.56□□□□□ -0.72
SHPRH-211ENST00000629427 VMA21Q3ZAQ7 101 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 UBE3DQ7Z6J8 389 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 TMEM208Q9BTX3 173 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 SLC26A1Q9H2B4 701 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 SLC25A32Q9H2D1 315 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 TMEM231Q9H6L2 316 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 B9D1Q9UPM9 204 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 A0A0A6YYD5 115 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 NME1P15531 152 aaKnown RBP10.56□□□□□ -0.72
SHPRH-211ENST00000629427 SUMO3P55854 103 aaPredicted RBP10.56□□□□□ -0.72
SHPRH-211ENST00000629427 PDCD1Q15116 288 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 TMEM179BQ7Z7N9 219 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 SLC24A4Q8NFF2 622 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 ICAM5Q9UMF0 924 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 ATAD5Q96QE3 1844 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 ZNF17P17021 662 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 CA6P23280 308 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 AMTP48728 403 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 TRA2AQ13595 282 aaKnown RBP eCLIP10.56□□□□□ -0.72
SHPRH-211ENST00000629427 OR2A1Q8NGT9 310 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 OR13D1Q8NGV5 346 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 KTI12Q96EK9 354 aaPredicted RBP10.56□□□□□ -0.72
SHPRH-211ENST00000629427 NKX6-2Q9C056 277 aaPredicted RBP10.56□□□□□ -0.72
SHPRH-211ENST00000629427 MEX3AA1L020 520 aaKnown RBP10.56□□□□□ -0.72
SHPRH-211ENST00000629427 DEFB108AA8MXU0 73 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 ONECUT2O95948 504 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 KRASP01116 189 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 CXCL10P02778 98 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 OR4E1P0C645 316 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 RHOBP62745 196 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 RNF151Q2KHN1 245 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 C4orf17Q53FE4 359 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 ADGRG7Q96K78 797 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 CHRDL1Q9BU40 450 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 TGIF2Q9GZN2 237 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 UBTD1Q9HAC8 227 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 LRP12Q9Y561 859 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 KPTNQ9Y664 436 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 AKR1C3P42330 323 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 LYG1Q8N1E2 194 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 NHLRC2Q8NBF2 726 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 OR5AP2Q8NGF4 316 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 SIAEQ9HAT2 523 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 FSCN3Q9NQT6 498 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 TAAR3PQ9P1P4 343 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 IGHV5-51A0A0C4DH38 117 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 H3BP45 60 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 CD3DP04234 171 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 Q1RN00 199 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 ACSM6Q6P461 480 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 LINC01465Q8N7H1 131 aa10.56□□□□□ -0.72
SHPRH-211ENST00000629427 EDIL3O43854 480 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 FBP1P09467 338 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 CD80P33681 288 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 THBS4P35443 961 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 EIF3IQ13347 325 aaKnown RBP10.55□□□□□ -0.72
SHPRH-211ENST00000629427 BTNL3Q6UXE8 466 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 FAM122BQ7Z309 247 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 ABI3BPQ7Z7G0 1075 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 UBALD1Q8TB05 177 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 TMED6Q8WW62 240 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 TMEM56Q96MV1 263 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 GABARAPL3Q9BY60 117 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 FLVCR2Q9UPI3 526 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 NPTNQ9Y639 398 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 CDK5Q00535 292 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 ACVR1Q04771 509 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 CDK5R1Q15078 307 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 DHRS7BQ6IAN0 325 aaPredicted RBP10.55□□□□□ -0.72
SHPRH-211ENST00000629427 RXFP4Q8TDU9 374 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 ARHGDIGQ99819 225 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 SOX15O60248 233 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 DGAT2L6Q6ZPD8 337 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 OR52N4Q8NGI2 321 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 OR8B4Q96RC9 309 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 TMEM147Q9BVK8 224 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 VN1R1Q9GZP7 353 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 GAL3ST2Q9H3Q3 398 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 RCL1Q9Y2P8 373 aaKnown RBP10.55□□□□□ -0.72
SHPRH-211ENST00000629427 LSM2Q9Y333 95 aaKnown RBP10.55□□□□□ -0.72
SHPRH-211ENST00000629427 PRRX1P54821 245 aa10.55□□□□□ -0.72
SHPRH-211ENST00000629427 TNFAIP6P98066 277 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms