RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 C1orf162Q8NEQ5 155 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 OR4M1Q8NGD0 313 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 BOD1Q96IK1 185 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 POM121L2Q96KW2 1035 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 KCNK15Q9H427 330 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 C14orf119Q9NWQ9 140 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 CGGBP1Q9UFW8 167 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 ETV7Q9Y603 341 aa8.21□□□□□ -1.1
PDLIM5-223ENST00000627587 SULT1B1O43704 296 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 OCMP0CE72 109 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 HTR2CP28335 458 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 CEACAM8P31997 349 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 THBS4P35443 961 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 RIN1Q13671 783 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 RGS21Q2M5E4 152 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 PYDC2Q56P42 97 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 DMRTC1Q5HYR2 192 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 GLYATL3Q5SZD4 288 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 MDP1Q86V88 176 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 OR8H2Q8N162 312 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 DTX3Q8N9I9 347 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 ZNF610Q8N9Z0 462 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 SEMA6DQ8NFY4 1073 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 OR52N4Q8NGI2 321 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 OR6M1Q8NGM8 313 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 PP6455Q8WZ26 134 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 AKAP1Q92667 903 aaKnown RBP eCLIP8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 SORCS2Q96PQ0 1159 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 SFXN3Q9BWM7 321 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 OPN3Q9H1Y3 402 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 PIGLQ9Y2B2 252 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 NF1P21359 2839 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 CSMD2Q7Z408 3487 aa8.2□□□□□ -1.1
PDLIM5-223ENST00000627587 A0A0G2JMP0 313 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 A0A0X1KG70 313 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 A0A1W2PR80 420 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 ISPDA4D126 451 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 MAGEB3O15480 346 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 SERPINA5P05154 406 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 CELA3BP08861 270 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 GLI4P10075 376 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 FAHP16930 419 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 ZNF14P17017 642 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 DNASE1P24855 282 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 MAP2K3P46734 347 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 ZNF92Q03936 586 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 P2RY6Q15077 328 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 C1orf100Q5SVJ3 147 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 CMTM4Q8IZR5 234 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 WDR31Q8NA23 367 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 OR4M2Q8NGB6 313 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 OR51D1Q8NGF3 324 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 OR4D6Q8NGJ1 314 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 RAB40AQ8WXH6 277 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 ITFG2Q969R8 447 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 SPSB4Q96A44 273 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 FAM3DQ96BQ1 224 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 ABHD1Q96SE0 405 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 CHST5Q9GZS9 411 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 METTL17Q9H7H0 456 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 LOC100289279A0A1B0GTE1 492 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 hCG_38984A0A1B0GV85 526 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 LDLRAD4O15165 306 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 CTAG2O75638 210 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 CSF3P09919 207 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 WNT5AP41221 380 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 RANBP1P43487 201 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 PITPNBP48739 271 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 POU3F4P49335 361 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 EFNB2P52799 333 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 CAPZA1P52907 286 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 FAM3AP98173 230 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 RIPPLY1Q0D2K3 151 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 MALLQ13021 153 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 UBE2V2Q15819 145 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 TBC1D28Q2M2D7 210 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 ZNF474Q6S9Z5 364 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 UTS2BQ765I0 119 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 CXorf67Q86X51 503 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 CDH26Q8IXH8 852 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 ZNF101Q8IZC7 436 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 C17orf78Q8N4C9 275 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 SLC30A7Q8NEW0 376 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 SYNPRQ8TBG9 265 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 APOBEC3DQ96AK3 386 aaPredicted RBP8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 S100A16Q96FQ6 103 aaKnown RBP8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 SPACA5Q96QH8 159 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 UQCC2Q9BRT2 126 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 ABCG5Q9H222 651 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 POFUT1Q9H488 388 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 TBC1D24Q9ULP9 559 aa8.19□□□□□ -1.1
PDLIM5-223ENST00000627587 MTORP42345 2549 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 ALX3O95076 343 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 NGFP01138 241 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 ALDOBP05062 364 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 HCKP08631 526 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 IL7P13232 177 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 ARSBP15848 533 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 OPRM1P35372 400 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 ZNF93P35789 620 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms