RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 CATSPERDQ86XM0 798 aa11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 OR5A2Q8NGI9 324 aa11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 PIGCQ92535 297 aa11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 RORBQ92753 470 aa11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 ITPKCQ96DU7 683 aa11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 FAM71F1Q96KD3 344 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 LYZL4Q96KX0 146 aa11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 NARFLQ9H6Q4 476 aa11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 FGF20Q9NP95 211 aaPredicted RBP11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 CHCHD3Q9NX63 227 aaKnown RBP11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 TREM2Q9NZC2 230 aa11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 MIOXQ9UGB7 285 aa11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 SLC22A13Q9Y226 551 aa11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 LRCH1Q9Y2L9 728 aa11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 V9GYS6 101 aa11.79□□□□□ -0.52
SNRPA1-216ENST00000626000 hCG_1807616A0A1W2PRN6 198 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 EFCAB10A6NFE3 127 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 J3QLI3 93 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 SYT7O43581 403 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 CRLF1O75462 422 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 GATBO75879 557 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 SERPINA3P01011 423 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 ISG15P05161 165 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 GRPP07492 148 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 HTR1AP08908 422 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 CCDC159P0C7I6 412 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 ACKR3P25106 362 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 RIPK1Q13546 671 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 ZMYND11Q15326 602 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 C11orf91Q3C1V1 193 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 CHRFAM7AQ494W8 412 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 TP53I3Q53FA7 332 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 ESCO2Q56NI9 601 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 CLVS2Q5SYC1 327 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 TMPRSS11AQ6ZMR5 421 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 OR1M1Q8NGA1 313 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 OR10Z1Q8NGY1 313 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 APH1BQ8WW43 257 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 PP6455Q8WZ26 134 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 OR5P3Q8WZ94 311 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 TMEM186Q96B77 213 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 C12orf43Q96C57 262 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 SOX7Q9BT81 388 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 ALG8Q9BVK2 526 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 SHARPINQ9H0F6 387 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 TLNRD1Q9H1K6 362 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 PATZ1Q9HBE1 687 aaKnown RBP11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 NEK6Q9HC98 313 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 ACOXLQ9NUZ1 547 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 C1orf123Q9NWV4 160 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 ERVK13-1Q9NX77 482 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 UBAP1Q9NZ09 502 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 PIGLQ9Y2B2 252 aa11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 NIPBLQ6KC79 2804 aaeCLIP11.78□□□□□ -0.52
SNRPA1-216ENST00000626000 A0A0G2JMP0 313 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 A0A0X1KG70 313 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 ZNF850A8MQ14 1090 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 INAFM1C9JVW0 142 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 LGALS8O00214 317 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 WBP4O75554 376 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 NRASP01111 189 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 PIPP12273 146 aaPredicted RBP11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 MUC1P15941 1255 aaPredicted RBP11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 ANOS1P23352 680 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 NPY4RP50391 375 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 GBX2P52951 348 aaPredicted RBP11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 ZNF154Q13106 437 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 ZNF404Q494X3 552 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 SPRNQ5BIV9 151 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 FAM76BQ5HYJ3 339 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 PRAMEF6Q5VXH4 476 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 KCTD8Q6ZWB6 473 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 Q71RC1 249 aaPredicted RBP11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 OR4M2Q8NGB6 313 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 OR52I1Q8NGK6 324 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 OR2G2Q8NGZ5 317 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 ZNF420Q8TAQ5 688 aaPredicted RBP11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 RNF170Q96K19 258 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 C4orf36Q96KX1 117 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 UFSP2Q9NUQ7 469 aa11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 CNOT2Q9NZN8 540 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 EXOSC1Q9Y3B2 195 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-216ENST00000626000 OOEPA6NGQ2 149 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 TMEM212A6NML5 194 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 A8MXK9 166 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 J3QLW9 94 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 CYB5R3P00387 301 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 IFNA2P01563 188 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 RPS2P15880 293 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 ZNF19P17023 458 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 IL2RGP31785 369 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 TGM4P49221 684 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 MPPED2Q15777 294 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 MICBQ29980 383 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 CCDC58Q4VC31 144 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 WDR38Q5JTN6 314 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 PLCXD3Q63HM9 321 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 TMEM42Q69YG0 159 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 ZNF573Q86YE8 665 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 OR8B3Q8NGG8 313 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms