RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 C1orf162Q8NEQ5 155 aaPredicted RBP14.22□□□□□ -0.13
LDB3-208ENST00000623007 ASB13Q8WXK3 278 aa14.22□□□□□ -0.13
LDB3-208ENST00000623007 GCDHQ92947 438 aaPredicted RBP14.22□□□□□ -0.13
LDB3-208ENST00000623007 SOX7Q9BT81 388 aa14.22□□□□□ -0.13
LDB3-208ENST00000623007 KCNK15Q9H427 330 aa14.22□□□□□ -0.13
LDB3-208ENST00000623007 SLC2A8Q9NY64 477 aa14.22□□□□□ -0.13
LDB3-208ENST00000623007 IL36GQ9NZH8 169 aa14.22□□□□□ -0.13
LDB3-208ENST00000623007 MRPL15Q9P015 296 aaKnown RBP14.22□□□□□ -0.13
LDB3-208ENST00000623007 EFSO43281 561 aa14.21□□□□□ -0.13
LDB3-208ENST00000623007 TPD52L2O43399 206 aaKnown RBP14.21□□□□□ -0.13
LDB3-208ENST00000623007 CREBL2O60519 120 aaPredicted RBP14.21□□□□□ -0.13
LDB3-208ENST00000623007 C1QBP02746 253 aa14.21□□□□□ -0.13
LDB3-208ENST00000623007 CD79AP11912 226 aa14.21□□□□□ -0.13
LDB3-208ENST00000623007 ANXA3P12429 323 aa14.21□□□□□ -0.13
LDB3-208ENST00000623007 HIST1H1DP16402 221 aaKnown RBP14.21□□□□□ -0.13
LDB3-208ENST00000623007 VEGFCP49767 419 aa14.21□□□□□ -0.13
LDB3-208ENST00000623007 SRSF6Q13247 344 aaKnown RBP14.21□□□□□ -0.13
LDB3-208ENST00000623007 OR10K2Q6IF99 312 aa14.21□□□□□ -0.13
LDB3-208ENST00000623007 UNQ6126/PRO20091Q6UXV3 157 aa14.21□□□□□ -0.13
LDB3-208ENST00000623007 ZSCAN4Q8NAM6 433 aaPredicted RBP14.21□□□□□ -0.13
LDB3-208ENST00000623007 CPEB3Q8NE35 698 aaKnown RBP14.21□□□□□ -0.13
LDB3-208ENST00000623007 PXT1Q8NFP0 134 aa14.21□□□□□ -0.13
LDB3-208ENST00000623007 OR6K3Q8NGY3 331 aa14.21□□□□□ -0.13
LDB3-208ENST00000623007 MYOZ1Q9NP98 299 aaPredicted RBP14.21□□□□□ -0.13
LDB3-208ENST00000623007 NPDC1Q9NQX5 325 aaPredicted RBP14.21□□□□□ -0.13
LDB3-208ENST00000623007 ING4Q9UNL4 249 aa14.21□□□□□ -0.13
LDB3-208ENST00000623007 UBE2QL1A1L167 161 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 KLK10O43240 276 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 AKR7A2O43488 359 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 CSTBP04080 98 aaKnown RBP14.2□□□□□ -0.14
LDB3-208ENST00000623007 CRHP06850 196 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 MRPS15P82914 257 aaKnown RBP14.2□□□□□ -0.14
LDB3-208ENST00000623007 C3AR1Q16581 482 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 LINC00303Q3SY05 128 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 RNASE10Q5GAN6 216 aaKnown RBP14.2□□□□□ -0.14
LDB3-208ENST00000623007 C1QTNF12Q5T7M4 302 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 PLXDC2Q6UX71 529 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 ASCL4Q6XD76 172 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 GLDNQ6ZMI3 551 aaPredicted RBP14.2□□□□□ -0.14
LDB3-208ENST00000623007 Q6ZS92 163 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 ASCL5Q7RTU5 278 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 NOXA1Q86UR1 476 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 BCL2L2Q92843 193 aaPredicted RBP14.2□□□□□ -0.14
LDB3-208ENST00000623007 DACT3Q96B18 629 aaPredicted RBP14.2□□□□□ -0.14
LDB3-208ENST00000623007 GINS4Q9BRT9 223 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 REPIN1Q9BWE0 567 aaKnown RBP14.2□□□□□ -0.14
LDB3-208ENST00000623007 RANBP3Q9H6Z4 567 aaPredicted RBP14.2□□□□□ -0.14
LDB3-208ENST00000623007 RANGRFQ9HD47 186 aaPredicted RBP14.2□□□□□ -0.14
LDB3-208ENST00000623007 CNTRLQ7Z7A1 2325 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 TMEM235A6NFC5 223 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 CD3DP04234 171 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 PATE4P0C8F1 98 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 PTHLHP12272 177 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 MGMTP16455 207 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 TUBG1P23258 451 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 CD83Q01151 205 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 ZNF92Q03936 586 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 CBX3Q13185 183 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 SLC22A6Q4U2R8 563 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 Q6ZT83 130 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 MRPL21Q7Z2W9 205 aaKnown RBP14.2□□□□□ -0.14
LDB3-208ENST00000623007 TRAPPC6BQ86SZ2 158 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 FJX1Q86VR8 437 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 OR51T1Q8NGJ9 327 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 FGFBP3Q8TAT2 258 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 ZNF486Q96H40 463 aaPredicted RBP14.2□□□□□ -0.14
LDB3-208ENST00000623007 HYLS1Q96M11 299 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 GAL3ST1Q99999 423 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 SELENOIQ9C0D9 397 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 TUBG2Q9NRH3 451 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 CSAG2Q9Y5P2 127 aa14.2□□□□□ -0.14
LDB3-208ENST00000623007 A0A096LPE4 126 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 A0A1W2PPZ6 126 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 C5orf49A4QMS7 147 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 MKRN2OSH3BPM6 223 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 ARPC1BO15143 372 aaKnown RBP14.19□□□□□ -0.14
LDB3-208ENST00000623007 SSNA1O43805 119 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 CST4P01036 141 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 HLA-HP01893 362 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 HOXD4P09016 255 aaPredicted RBP14.19□□□□□ -0.14
LDB3-208ENST00000623007 TMEM225BP0DP42 221 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 NAT1P18440 290 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 ACKR3P25106 362 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 ZP1P60852 638 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 UBE2NP61088 152 aaKnown RBP14.19□□□□□ -0.14
LDB3-208ENST00000623007 PMP22Q01453 160 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 GUCA2AQ02747 115 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 HGFACQ04756 655 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 RSU1Q15404 277 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 GUSBP1Q15486 140 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 TBC1D28Q2M2D7 210 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 MOGAT2Q3SYC2 334 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 INO80CQ6PI98 192 aaPredicted RBP14.19□□□□□ -0.14
LDB3-208ENST00000623007 TFAP2EQ6VUC0 442 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 OR2AE1Q8NHA4 323 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 POM121L2Q96KW2 1035 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 TRIB1Q96RU8 372 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 OR10A4Q9H209 315 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 TP63Q9H3D4 680 aaPredicted RBP14.19□□□□□ -0.14
LDB3-208ENST00000623007 OBP2BQ9NPH6 170 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms