RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 CCL25O15444 150 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 XRCC3O43542 346 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 ZNF432O94892 652 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 GABRR1P24046 479 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 SELENOTP62341 195 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 MRPS21P82921 87 aaKnown RBP11.08□□□□□ -0.64
LITAF-221ENST00000622633 HAGHQ16775 308 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 VWA2Q5GFL6 755 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 FNDC7Q5VTL7 733 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 FAHD2BQ6P2I3 314 aaPredicted RBP11.08□□□□□ -0.64
LITAF-221ENST00000622633 TEX38Q6PEX7 206 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 SLC35E3Q7Z769 313 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 EID2Q8N6I1 236 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 ZNF676Q8N7Q3 588 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 SAT2Q96F10 170 aaPredicted RBP11.08□□□□□ -0.64
LITAF-221ENST00000622633 FAHD2AQ96GK7 314 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 OR5B2Q96R09 309 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 S1PR5Q9H228 398 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 TDRD6O60522 2096 aaKnown RBP11.08□□□□□ -0.64
LITAF-221ENST00000622633 SPTY2D1-AS1A0A0U1RR47 76 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 OR4C45A6NMZ5 311 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 C17orf51A8MQB3 221 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 C17orf105B2RV13 164 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 KCNAB3O43448 404 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 SRPX2O60687 465 aaPredicted RBP11.07□□□□□ -0.64
LITAF-221ENST00000622633 UTS2O95399 124 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 ASAH2BP0C7U1 165 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 DRD1P21728 446 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 TAGLN2P37802 199 aaKnown RBP11.07□□□□□ -0.64
LITAF-221ENST00000622633 LPAR6P43657 344 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 AFF3P51826 1226 aaKnown RBP11.07□□□□□ -0.64
LITAF-221ENST00000622633 NAAAQ02083 359 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 LRRC69Q6ZNQ3 347 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 PRR22Q8IZ63 422 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 OR5T1Q8NG75 326 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 OR4S1Q8NGB4 309 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 TAAR8Q969N4 342 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 RELTQ969Z4 430 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 FOXN4Q96NZ1 517 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 TSPAN32Q96QS1 320 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 NKX3-1Q99801 234 aaPredicted RBP11.07□□□□□ -0.64
LITAF-221ENST00000622633 ATG5Q9H1Y0 275 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 PLEKHA2Q9HB19 425 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 PNO1Q9NRX1 252 aaKnown RBP11.07□□□□□ -0.64
LITAF-221ENST00000622633 CLEC1BQ9P126 229 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 MYOTQ9UBF9 498 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 HS3ST3B1Q9Y662 390 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 MPDZO75970 2070 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 SCDO00767 359 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 GLSO94925 669 aaPredicted RBP11.07□□□□□ -0.64
LITAF-221ENST00000622633 CXCL1P09341 107 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 OR4A8P0C604 315 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 RPL29P47914 159 aaKnown RBP11.07□□□□□ -0.64
LITAF-221ENST00000622633 CDC34P49427 236 aaPredicted RBP11.07□□□□□ -0.64
LITAF-221ENST00000622633 SRSF4Q08170 494 aaKnown RBP11.07□□□□□ -0.64
LITAF-221ENST00000622633 RASGEF1BQ0VAM2 473 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 MRPL49Q13405 166 aaKnown RBP11.07□□□□□ -0.64
LITAF-221ENST00000622633 C1QL3Q5VWW1 255 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 OR8G2PQ6IF36 304 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 BTNL8Q6UX41 500 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 MAML2Q8IZL2 1156 aaPredicted RBP11.07□□□□□ -0.64
LITAF-221ENST00000622633 ZNF563Q8TA94 476 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 ABHD5Q8WTS1 349 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 LIPHQ8WWY8 451 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 HAS2Q92819 552 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 MUCL1Q96DR8 90 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 AMELYQ99218 206 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 ELOVL1Q9BW60 279 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 NXF5Q9H1B4 397 aaKnown RBP11.07□□□□□ -0.64
LITAF-221ENST00000622633 CYTL1Q9NRR1 136 aa11.07□□□□□ -0.64
LITAF-221ENST00000622633 CACNA1CQ13936 2221 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 TRBV11-1A0A0K0K1C0 115 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 A0A1B0GTI1 187 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 AHRRA9YTQ3 701 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 ZNF264O43296 627 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 VAMP5O95183 116 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 PNPP00491 289 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 TRGC2P03986 189 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 TRGC1P0CF51 173 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 ALOX5APP20292 161 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 EFNB2P52799 333 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 ATP1B3P54709 279 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 RAB1AP62820 205 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 MOGAT2Q3SYC2 334 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 MRPL52Q86TS9 123 aaKnown RBP11.06□□□□□ -0.64
LITAF-221ENST00000622633 C11orf42Q8N5U0 333 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 TMEM106AQ96A25 262 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 ZNF775Q96BV0 537 aaPredicted RBP11.06□□□□□ -0.64
LITAF-221ENST00000622633 CDC6Q99741 560 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 SYT3Q9BQG1 590 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 RTN4RQ9BZR6 473 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.06□□□□□ -0.64
LITAF-221ENST00000622633 CYP8B1Q9UNU6 501 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 ETV7Q9Y603 341 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 TRBV5-7A0A0A0MS05 114 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 FBXO45P0C2W1 286 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 CCR5P51681 352 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 DMWDQ09019 674 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 Q5PR19 223 aa11.06□□□□□ -0.64
LITAF-221ENST00000622633 YOD1Q5VVQ6 348 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms