RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 RPL19P84098 196 aaKnown RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 COL10A1Q03692 680 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 PLEKHS1Q5SXH7 462 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 DEFB128Q7Z7B8 93 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 METTL27Q8N6F8 245 aaPredicted RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 OR52E2Q8NGJ4 325 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 OR5L2Q8NGL0 311 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 OR5D18Q8NGL1 313 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 OR1E3Q8WZA6 343 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 TBX15Q96SF7 602 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 EFCAB11Q9BUY7 163 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 WWTR1Q9GZV5 400 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 CSTL1Q9H114 145 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 ZNF430Q9H8G1 570 aaPredicted RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 HSF4Q9ULV5 492 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 TRAV8-7A0A075B6U6 113 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 A0A1W2PS29 197 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 HSD17B6O14756 317 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 TNFRSF6BO95407 300 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 MAKP20794 623 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 FUT3P21217 361 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 GRPRP30550 384 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 PPP1CCP36873 323 aaKnown RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 ZNF468Q5VIY5 522 aaPredicted RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 RSPO2Q6UXX9 243 aaPredicted RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 ZNF66Q6ZN08 573 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 GBGT1Q8N5D6 347 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 ZNF676Q8N7Q3 588 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 OR2AP1Q8NGE2 309 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 OR6K6Q8NGW6 343 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 GPR119Q8TDV5 335 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 C2orf15Q8WU43 125 aaKnown RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 ORAOV1Q8WV07 137 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 C5orf30Q96GV9 206 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 SLC17A5Q9NRA2 495 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 ZNF107Q9UII5 783 aaPredicted RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 RBM7Q9Y580 266 aaKnown RBP7.06□□□□□ -1.28
VPS11-209ENST00000622309 SZT2Q5T011 3432 aa7.06□□□□□ -1.28
VPS11-209ENST00000622309 ELOA3DA6NLF2 546 aaPredicted RBP7.05□□□□□ -1.28
VPS11-209ENST00000622309 B4DEV8 164 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 ZNF264O43296 627 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 SLC16A8O95907 504 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 ONECUT2O95948 504 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 TACSTD2P09758 323 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 DTYMKP23919 212 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 RPL4P36578 427 aaKnown RBP7.05□□□□□ -1.28
VPS11-209ENST00000622309 RANP62826 216 aaKnown RBP7.05□□□□□ -1.28
VPS11-209ENST00000622309 AGERQ15109 404 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 ELOA3BQ3SY89 546 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 LYG1Q8N1E2 194 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 ELOA3Q8NG57 546 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 TMEM106AQ96A25 262 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 ZNF775Q96BV0 537 aaPredicted RBP7.05□□□□□ -1.28
VPS11-209ENST00000622309 PLD4Q96BZ4 506 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 DNAJA3Q96EY1 480 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 TRAV27A0A087WT01 109 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 A0A1W2PQ45 241 aaPredicted RBP7.05□□□□□ -1.28
VPS11-209ENST00000622309 A0A1W2PQY0 241 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 FITM1A5D6W6 292 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 MC5RP33032 325 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 PRPS1P60891 318 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 HLA-DRB3P79483 266 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 UBE2V1Q13404 147 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 OR4K13Q8NH42 304 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 PFN4Q8NHR9 129 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 MARCH1Q8TCQ1 289 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 ZG16BQ96DA0 208 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 ACY3Q96HD9 319 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 ZNF479Q96JC4 524 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 RNF2Q99496 336 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 ZFYVE21Q9BQ24 234 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 KXD1Q9BQD3 176 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 ANGPTL4Q9BY76 406 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 NGBQ9NPG2 151 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 TM7SF3Q9NS93 570 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 SLC25A13Q9UJS0 675 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 KCNK6Q9Y257 313 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 A0A1B0GVT2 93 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 A0A1B0GW64 132 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 ZNF860A6NHJ4 632 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 TDGF1P13385 188 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 GZMHP20718 246 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 UCP3P55916 312 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 TMEM128Q5BJH2 165 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 LSRQ86X29 649 aaPredicted RBP7.05□□□□□ -1.28
VPS11-209ENST00000622309 OR52E1Q8NGJ3 308 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 OR51A2Q8NGJ7 313 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 PGAM5Q96HS1 289 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 Q96M85 177 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 LYSMD1Q96S90 227 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 ADAP2Q9NPF8 381 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 KLK13Q9UKR3 277 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 CLDN16Q9Y5I7 305 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 SPACA6W5XKT8 324 aa7.05□□□□□ -1.28
VPS11-209ENST00000622309 PLXNA3P51805 1871 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 RANBP2P49792 3224 aaKnown RBP7.04□□□□□ -1.28
VPS11-209ENST00000622309 DOCK4Q8N1I0 1966 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 MYO7AQ13402 2215 aa7.04□□□□□ -1.28
VPS11-209ENST00000622309 FBLL1A6NHQ2 334 aaKnown RBP7.04□□□□□ -1.28
VPS11-209ENST00000622309 THY1P04216 161 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms