RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 HGFACQ04756 655 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 BSPH1Q075Z2 132 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 CD300CQ08708 224 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 EFNB3Q15768 340 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 SGCAQ16586 387 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 CDONQ4KMG0 1287 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ACSM3Q53FZ2 586 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ESCO2Q56NI9 601 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 UBE2NLQ5JXB2 153 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 THEM4Q5T1C6 240 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 IDNKQ5T6J7 187 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 LINC01590Q5TEZ4 76 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 METTL11BQ5VVY1 283 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 PLBD1Q6P4A8 553 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 SLC22A25Q6T423 547 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 BTN2A1Q7KYR7 527 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 BCDIN3DQ7Z5W3 292 aaKnown RBP4.53□□□□□ -1.68
SHMT1-211ENST00000618902 KLBQ86Z14 1044 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 FBXL14Q8N1E6 418 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 MUC15Q8N387 334 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 PAQR4Q8N4S7 273 aaPredicted RBP4.53□□□□□ -1.68
SHMT1-211ENST00000618902 CPEB3Q8NE35 698 aaKnown RBP4.53□□□□□ -1.68
SHMT1-211ENST00000618902 SLC26A10Q8NG04 563 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 OR51L1Q8NGJ5 315 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 OR51G2Q8NGK0 314 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 OR1J2Q8NGS2 313 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 AKR7LQ8NHP1 331 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 UBASH3BQ8TF42 649 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 C11orf40Q8WZ69 217 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 SMIM19Q96E16 107 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 RNF170Q96K19 258 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 RBP7Q96R05 134 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 TMED9Q9BVK6 235 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF416Q9BWM5 594 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 WNT5BQ9H1J7 359 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 PLEKHA1Q9HB21 404 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 SRA1Q9HD15 236 aaKnown RBP4.53□□□□□ -1.68
SHMT1-211ENST00000618902 RANGRFQ9HD47 186 aaPredicted RBP4.53□□□□□ -1.68
SHMT1-211ENST00000618902 HINT3Q9NQE9 182 aaKnown RBP4.53□□□□□ -1.68
SHMT1-211ENST00000618902 DLL4Q9NR61 685 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 NLKQ9UBE8 527 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 GRHPRQ9UBQ7 328 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 CGGBP1Q9UFW8 167 aaPredicted RBP4.53□□□□□ -1.68
SHMT1-211ENST00000618902 NUFIP1Q9UHK0 495 aaKnown RBP4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ATPIF1Q9UII2 106 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF107Q9UII5 783 aaPredicted RBP4.53□□□□□ -1.68
SHMT1-211ENST00000618902 SCP2D1Q9UJQ7 156 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 PLEKHA6Q9Y2H5 1048 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ZNF281Q9Y2X9 895 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 ALG5Q9Y673 324 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 LHFPL6Q9Y693 200 aa4.53□□□□□ -1.68
SHMT1-211ENST00000618902 LOC100509620A0A075B734 347 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 A0A0A6YYH2 397 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 IGHV2OR16-5A0A0B4J2B6 119 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 A0A1B0GW55 424 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 A0A1W2PPL8 197 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 C5orf63A6NC05 138 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 TVP23AA6NH52 213 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 A6NJ64 397 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 SNRPGP15A8MWD9 76 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 E7EQL1 145 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ATP6V1G2-DDX39BF2Z307 99 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 GABARAPH6UMI1 98 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 M0R1B8 84 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 XKRYO14609 159 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ICMTO60725 284 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 NOS1APO75052 506 aaPredicted RBP4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF780AO75290 641 aaPredicted RBP4.52□□□□□ -1.69
SHMT1-211ENST00000618902 IL5P05113 134 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 CST2P09228 141 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 DUX4L2P0CJ85 424 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 DUX4L3P0CJ86 424 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 DUX4L4P0CJ87 422 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 DUX4L5P0CJ88 424 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 DUX4L6P0CJ89 424 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 DUX4L7P0CJ90 424 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 OR8G3PP0DMU2 310 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 CD79AP11912 226 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 CCL2P13500 99 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 SLC25A16P16260 332 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ZNF14P17017 642 aaPredicted RBP4.52□□□□□ -1.69
SHMT1-211ENST00000618902 SPI1P17947 270 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 SRMP19623 302 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 RPS27P42677 84 aaKnown RBP4.52□□□□□ -1.69
SHMT1-211ENST00000618902 PTH2RP49190 550 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 PPOXP50336 477 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 CCR9P51686 369 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 ARPC4P59998 168 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 GMFBP60983 142 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 RAB1AP62820 205 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 HIST1H3AP68431 136 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 MRPS11P82912 194 aaKnown RBP4.52□□□□□ -1.69
SHMT1-211ENST00000618902 PSG4Q00888 419 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 EGR3Q06889 387 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 BAMBIQ13145 260 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 GPR176Q14439 515 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 RAB35Q15286 201 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 GRK1Q15835 563 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 FAM189A2Q15884 450 aa4.52□□□□□ -1.69
SHMT1-211ENST00000618902 KCNMB1Q16558 191 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 196 ms