RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 ZFPL1O95159 310 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 F12P00748 615 aaPredicted RBP3.9□□□□□ -1.79
SYCP1-210ENST00000618516 NRASP01111 189 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 TMEM225BP0DP42 221 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 USF1P22415 310 aaPredicted RBP3.9□□□□□ -1.79
SYCP1-210ENST00000618516 PDLIM4P50479 330 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 MTCP1P56278 107 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 CLDN12P56749 244 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 PSMA6P60900 246 aaKnown RBP3.9□□□□□ -1.79
SYCP1-210ENST00000618516 GRB2P62993 217 aaKnown RBP3.9□□□□□ -1.79
SYCP1-210ENST00000618516 DOC2BQ14184 412 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 ZMYND11Q15326 602 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 SWI5Q1ZZU3 235 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 TMEM249Q2WGJ8 235 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 ZNF829Q3KNS6 432 aaPredicted RBP3.9□□□□□ -1.79
SYCP1-210ENST00000618516 OGFRL1Q5TC84 451 aaPredicted RBP3.9□□□□□ -1.79
SYCP1-210ENST00000618516 HIST2H2BDQ6DRA6 164 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 BRD3OSQ6XYD6 125 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 ZNF782Q6ZMW2 699 aaPredicted RBP3.9□□□□□ -1.79
SYCP1-210ENST00000618516 SEMA6DQ8NFY4 1073 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 NEK7Q8TDX7 302 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 GGHQ92820 318 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 TMEM106AQ96A25 262 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 CREB3L1Q96BA8 519 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 ADAT3Q96EY9 351 aaPredicted RBP3.9□□□□□ -1.79
SYCP1-210ENST00000618516 OR14A2Q96R54 314 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 GCM1Q9NP62 436 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 SIRT7Q9NRC8 400 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 DDX28Q9NUL7 540 aaKnown RBP3.9□□□□□ -1.79
SYCP1-210ENST00000618516 TMEM106BQ9NUM4 274 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 TBCCD1Q9NVR7 557 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 FRRS1LQ9P0K9 344 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 WARS2Q9UGM6 360 aaKnown RBP3.9□□□□□ -1.79
SYCP1-210ENST00000618516 RPL36Q9Y3U8 105 aaKnown RBP3.9□□□□□ -1.79
SYCP1-210ENST00000618516 SIRT4Q9Y6E7 314 aaPredicted RBP3.9□□□□□ -1.79
SYCP1-210ENST00000618516 TMEM14AQ9Y6G1 99 aa3.9□□□□□ -1.79
SYCP1-210ENST00000618516 HTR3EA5X5Y0 456 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 ARRDC5A6NEK1 342 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 METTL15A6NJ78 407 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 CLDN25C9JDP6 229 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 F8VVB4 439 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 F8VWA3 439 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 NXPH2O95156 264 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 IGF2P01344 180 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 MT-ND2P03891 347 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 EGR1P18146 543 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 GLRA1P23415 457 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 OMGP23515 440 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 ISL1P61371 349 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 GNB2P62879 340 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 SLC22A6Q4U2R8 563 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 ZNF691Q5VV52 312 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 OR10K2Q6IF99 312 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 CALHM1Q8IU99 346 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 PRSS35Q8N3Z0 413 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 SETD9Q8NE22 299 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 OR8G5Q8NG78 346 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 OR2G2Q8NGZ5 317 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 CLDND2Q8NHS1 167 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 GHSRQ92847 366 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 TIMD4Q96H15 378 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 MEGF10Q96KG7 1140 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 USB1Q9BQ65 265 aaKnown RBP3.89□□□□□ -1.79
SYCP1-210ENST00000618516 ERVK13-1Q9NX77 482 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 SCN3BQ9NY72 215 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 ERGIC3Q9Y282 383 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 GSTK1Q9Y2Q3 226 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 A0A1W2PP11 408 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 NPIPB13A6NJU9 1138 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 NPIPB4C9JG80 1138 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 SLC1A7O00341 560 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 OR2T7P0C7T2 308 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 LIMS3P0CW19 117 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 LIMS4P0CW20 117 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 GABRR1P24046 479 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 KIR3DL2P43630 455 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 GBX2P52951 348 aaPredicted RBP3.89□□□□□ -1.79
SYCP1-210ENST00000618516 ARF6P62330 175 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 DYNC1I2Q13409 638 aaKnown RBP3.89□□□□□ -1.79
SYCP1-210ENST00000618516 C11orf71Q6IPW1 123 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 DTX2Q86UW9 622 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 KLHL36Q8N4N3 616 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 NUP37Q8NFH4 326 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 OR2T27Q8NH04 317 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 OR5AK2Q8NH90 309 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 RDH5Q92781 318 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 HAVCR1Q96D42 359 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 Q96MT0 163 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 ZNF184Q99676 751 aaPredicted RBP3.89□□□□□ -1.79
SYCP1-210ENST00000618516 C1QTNF5Q9BXJ0 243 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 BEX2Q9BXY8 128 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 GABARAPL1Q9H0R8 117 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 ZNF442Q9H7R0 627 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 SMURF1Q9HCE7 757 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 RBFOX1Q9NWB1 397 aaKnown RBP3.89□□□□□ -1.79
SYCP1-210ENST00000618516 PAK1IP1Q9NWT1 392 aaPredicted RBP3.89□□□□□ -1.79
SYCP1-210ENST00000618516 USE1Q9NZ43 259 aa3.89□□□□□ -1.79
SYCP1-210ENST00000618516 A0A1W2PQ09 198 aa3.88□□□□□ -1.79
SYCP1-210ENST00000618516 RFPL4AA6NLU0 287 aa3.88□□□□□ -1.79
SYCP1-210ENST00000618516 RFPL4AL1F8VTS6 287 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms