RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 OOEPA6NGQ2 149 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 E9PQ18 207 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 IGLV3-1P01715 115 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 WNT2P09544 360 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 OR2T7P0C7T2 308 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 MTNR1AP48039 350 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 PITPNBP48739 271 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 C1orf229Q6ZS94 237 aaPredicted RBP13.35□□□□□ -0.27
BRCA1-228ENST00000618469 KCTD8Q6ZWB6 473 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 THAP5Q7Z6K1 395 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 GALNT4Q8N4A0 578 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 GCSAMQ8N6F7 178 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 TEX29Q8N6K0 151 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 SEMA6DQ8NFY4 1073 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 OR2T27Q8NH04 317 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 C7orf69Q9H7B7 122 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 MMP26Q9NRE1 261 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 OR52A1Q9UKL2 312 aa13.35□□□□□ -0.27
BRCA1-228ENST00000618469 WNK2Q9Y3S1 2297 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 TRAV38-1A0A0B4J264 116 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 PPIAL4CA0A0B4J2A2 164 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 TRAPPC2LH3BP13 241 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 TCF21O43680 179 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 DHRS3O75911 302 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 FAHP16930 419 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 SNRPGP62308 76 aaKnown RBP13.34□□□□□ -0.27
BRCA1-228ENST00000618469 KCNJ8Q15842 424 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 CEP78Q5JTW2 689 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 MEDAGQ5VYS4 303 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 LYPD2Q6UXB3 125 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 WDR82Q6UXN9 313 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 FAM220AQ7Z4H9 259 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 C1QL2Q7Z5L3 287 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 OR5P3Q8WZ94 311 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 RNFT2Q96EX2 444 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 FGF23Q9GZV9 251 aaPredicted RBP13.34□□□□□ -0.27
BRCA1-228ENST00000618469 TRIM36Q9NQ86 728 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 CLN8Q9UBY8 286 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 AASSQ9UDR5 926 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 METRNQ9UJH8 293 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 PIGLQ9Y2B2 252 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 POLR3KQ9Y2Y1 108 aaPredicted RBP13.34□□□□□ -0.27
BRCA1-228ENST00000618469 SNX5Q9Y5X3 404 aa13.34□□□□□ -0.27
BRCA1-228ENST00000618469 TENM1Q9UKZ4 2725 aa13.33□□□□□ -0.27
BRCA1-228ENST00000618469 IGHV3OR15-7A0A075B7D8 119 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 METTL15A6NJ78 407 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 TMEM210A6NLX4 147 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 P2RY10O00398 339 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 CDIPTO14735 213 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 RGS9O75916 674 aaPredicted RBP13.33□□□□□ -0.28
BRCA1-228ENST00000618469 GYPAP02724 150 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 ATP6V1B1P15313 513 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 ZNF12P17014 697 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 CPT2P23786 658 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 ACTC1P68032 377 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 ACTA1P68133 377 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 ZNF85Q03923 595 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 RIPPLY1Q0D2K3 151 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 SCGB2A2Q13296 93 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 OCLNQ16625 522 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 ODF4Q2M2E3 257 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 PLCXD3Q63HM9 321 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 FAM90A1Q86YD7 464 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 C11orf53Q8IXP5 236 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 ENTHD1Q8IYW4 607 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 ELMOD2Q8IZ81 293 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 RPL3LQ92901 407 aaKnown RBP13.33□□□□□ -0.28
BRCA1-228ENST00000618469 RNF170Q96K19 258 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 TECTBQ96PL2 329 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 HIST1H2AAQ96QV6 131 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 MRI1Q9BV20 369 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 TLNRD1Q9H1K6 362 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 RNPEPL1Q9HAU8 725 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 ACOXLQ9NUZ1 547 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 CTSZQ9UBR2 303 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 OPN4Q9UHM6 478 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 ENPP5Q9UJA9 477 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 GNG8Q9UK08 70 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 SLC22A13Q9Y226 551 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 INSIG2Q9Y5U4 225 aa13.33□□□□□ -0.28
BRCA1-228ENST00000618469 SNTNA6NMZ2 147 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 ADAM20O43506 726 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 MTRF1O75570 445 aaKnown RBP13.32□□□□□ -0.28
BRCA1-228ENST00000618469 SULT1C4O75897 302 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 EPHA1P21709 976 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 PSMB10P40306 273 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 GPM6AP51674 278 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 GMFBP60983 142 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 ZNF91Q05481 1191 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 RCN1Q15293 331 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 TP53I3Q53FA7 332 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 ARMCX4Q5H9R4 360 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 DMRTC1Q5HYR2 192 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 SLC25A30Q5SVS4 291 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 ZNF684Q5T5D7 378 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 ZBTB37Q5TC79 503 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 WDR25Q64LD2 544 aaPredicted RBP13.32□□□□□ -0.28
BRCA1-228ENST00000618469 CATSPERDQ86XM0 798 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 OCEL1Q9H607 264 aa13.32□□□□□ -0.28
BRCA1-228ENST00000618469 SMPD3Q9NY59 655 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms