RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 DNPH1O43598 174 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 CSF3P09919 207 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 NME2P22392 152 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 RAD52P43351 418 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 SELENOPP49908 381 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 ACSM1Q08AH1 577 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 KCNIP4Q6PIL6 250 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 DPPA2Q7Z7J5 298 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 SRRQ9GZT4 340 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 POLDIP2Q9Y2S7 368 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 DXOO77932 396 aaKnown RBP12.34□□□□□ -0.43
CIITA-213ENST00000618327 TPPPO94811 219 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 SIX6O95475 246 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 C1QBP02746 253 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 TGIF1Q15583 401 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 PABPC1L2AQ5JQF8 200 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 FJX1Q86VR8 437 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 ZDHHC23Q8IYP9 409 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 OR51S1Q8NGJ8 323 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 SPACA1Q9HBV2 294 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 PLXNA4Q9HCM2 1894 aa12.33□□□□□ -0.43
CIITA-213ENST00000618327 M0R1B8 84 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 PAN3Q58A45 887 aaKnown RBP12.33□□□□□ -0.44
CIITA-213ENST00000618327 CD276Q5ZPR3 534 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 GDPD3Q7L5L3 318 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 ZNF573Q86YE8 665 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 GCDHQ92947 438 aaPredicted RBP12.33□□□□□ -0.44
CIITA-213ENST00000618327 C20orf85Q9H1P6 137 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 PCDHB10Q9UN67 800 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 ERVK-16P61578 105 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 C3AR1Q16581 482 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 ADAM5Q6NVV9 412 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 ARPC5LQ9BPX5 153 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 AKIRIN1Q9H9L7 192 aaPredicted RBP12.33□□□□□ -0.44
CIITA-213ENST00000618327 ZNF71Q9NQZ8 489 aaPredicted RBP12.33□□□□□ -0.44
CIITA-213ENST00000618327 PURGQ9UJV8 347 aaKnown RBP12.33□□□□□ -0.44
CIITA-213ENST00000618327 IGHV3-64DA0A0J9YX35 117 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 DEGS1O15121 323 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 OGG1O15527 345 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 RECKO95980 971 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 HLA-HP01893 362 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 PATE4P0C8F1 98 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 GABRB1P18505 474 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 ZNF718Q3SXZ3 478 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 APCDD1LQ8NCL9 501 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 FAM213BQ8TBF2 198 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 ZPLD1Q8TCW7 415 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 C22orf15Q8WYQ4 148 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 UFSP2Q9NUQ7 469 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 GHRLQ9UBU3 117 aa12.33□□□□□ -0.44
CIITA-213ENST00000618327 FABP6P51161 128 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 LSM6P62312 80 aaKnown RBP12.32□□□□□ -0.44
CIITA-213ENST00000618327 TAF9Q16594 264 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 FBXW12Q6X9E4 464 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 WFDC8Q8IUA0 241 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 MARC2Q969Z3 335 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 SGK3Q96BR1 496 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 PATZ1Q9HBE1 687 aaKnown RBP12.32□□□□□ -0.44
CIITA-213ENST00000618327 CYSLTR2Q9NS75 346 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 DECR2Q9NUI1 292 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 CEP250Q9BV73 2442 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 MASP2O00187 686 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 MSTNO14793 375 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 BAK1Q16611 211 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 H3F3CQ6NXT2 135 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 SLC25A26Q70HW3 274 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 TSEN54Q7Z6J9 526 aaKnown RBP12.32□□□□□ -0.44
CIITA-213ENST00000618327 ABHD3Q8WU67 409 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 SLC26A1Q9H2B4 701 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 TAS2R5Q9NYW4 299 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 A0A0J9YW62 118 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 NKX2-8O15522 239 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 HBE1P02100 147 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 BTG1P62324 171 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 MRPS34P82930 218 aaKnown RBP12.32□□□□□ -0.44
CIITA-213ENST00000618327 TUSC5Q8IXB3 177 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 PRSS35Q8N3Z0 413 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 SCARB1Q8WTV0 552 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 SECTM1Q8WVN6 248 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 TTTY12Q9BZ98 90 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 OPA3Q9H6K4 179 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 H7C1Q1 480 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 HAAOP46952 286 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 ZP4Q12836 540 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 BARHL1Q9BZE3 327 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 ZNF391Q9UJN7 358 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 CACNA1HO95180 2353 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 HEATR5BQ9P2D3 2071 aa12.32□□□□□ -0.44
CIITA-213ENST00000618327 DHRS3O75911 302 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 ZIC2O95409 532 aaPredicted RBP12.31□□□□□ -0.44
CIITA-213ENST00000618327 SPATA46Q5T0L3 261 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 C17orf82Q86X59 251 aaPredicted RBP12.31□□□□□ -0.44
CIITA-213ENST00000618327 NUDCD2Q8WVJ2 157 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 DDOQ99489 341 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 FOXJ2Q9P0K8 574 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 IL17BQ9UHF5 180 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 ADAM10O14672 748 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 HS3ST1O14792 307 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 ZNF728P0DKX0 622 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 MGMTP16455 207 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms