RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 RAB3DO95716 219 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 MELTFP08582 738 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 NAT2P11245 290 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 CCL2P13500 99 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 CCNOP22674 350 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 FAM3AP98173 230 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 RBMS2Q15434 407 aaKnown RBP15.06■□□□□ 0
PCDHGC3-205ENST00000617641 ZNF584Q8IVC4 421 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 OR4S1Q8NGB4 309 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 C1QTNF5Q9BXJ0 243 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 TINAGL1Q9GZM7 467 aaPredicted RBP15.06■□□□□ 0
PCDHGC3-205ENST00000617641 IRF2BPLQ9H1B7 796 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 FAM186AA6NE01 2351 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 A0A1B0GUH1 482 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 hCG_38984A0A1B0GV85 526 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 SSNA1O43805 119 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 PRAF2O60831 178 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 CEACAM4O75871 244 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 CXCL3P19876 107 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 PLAC9Q5JTB6 97 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 THOC7Q6I9Y2 204 aaKnown RBP15.06■□□□□ 0
PCDHGC3-205ENST00000617641 FGD2Q7Z6J4 655 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 GVQW1Q8N7I0 195 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 ATPIF1Q9UII2 106 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 ZNF391Q9UJN7 358 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 ZNF222Q9UK12 451 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 BOLA1Q9Y3E2 137 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 ZNF175Q9Y473 711 aa15.06■□□□□ 0
PCDHGC3-205ENST00000617641 CEP250Q9BV73 2442 aa15.05■□□□□ 0
PCDHGC3-205ENST00000617641 CHRM2P08172 466 aa15.05■□□□□ 0
PCDHGC3-205ENST00000617641 ALDH3B1P43353 468 aa15.05■□□□□ 0
PCDHGC3-205ENST00000617641 P4HA3Q7Z4N8 544 aa15.05■□□□□ 0
PCDHGC3-205ENST00000617641 NUDT16L1Q9BRJ7 211 aaKnown RBP15.05■□□□□ 0
PCDHGC3-205ENST00000617641 PRDM14Q9GZV8 571 aa15.05■□□□□ 0
PCDHGC3-205ENST00000617641 RGCCQ9H4X1 137 aa15.05■□□□□ 0
PCDHGC3-205ENST00000617641 AKAP13Q12802 2813 aa15.05■□□□□ -0
PCDHGC3-205ENST00000617641 FAM230AA0A1W2PPH8 454 aa15.05■□□□□ -0
PCDHGC3-205ENST00000617641 C5orf49A4QMS7 147 aa15.05■□□□□ -0
PCDHGC3-205ENST00000617641 ZNF736B4DX44 427 aaPredicted RBP15.05■□□□□ -0
PCDHGC3-205ENST00000617641 IL18BPO95998 194 aa15.05■□□□□ -0
PCDHGC3-205ENST00000617641 SERPINA2P20848 420 aa15.05■□□□□ -0
PCDHGC3-205ENST00000617641 MTCP1P56278 107 aa15.05■□□□□ -0
PCDHGC3-205ENST00000617641 TMEM50BP56557 158 aa15.05■□□□□ -0
PCDHGC3-205ENST00000617641 SMUG1Q53HV7 270 aa15.05■□□□□ -0
PCDHGC3-205ENST00000617641 METTL11BQ5VVY1 283 aa15.05■□□□□ -0
PCDHGC3-205ENST00000617641 CDH24Q86UP0 819 aa15.05■□□□□ -0
PCDHGC3-205ENST00000617641 RAB3CQ96E17 227 aa15.05■□□□□ -0
PCDHGC3-205ENST00000617641 CST11Q9H112 138 aa15.05■□□□□ -0
PCDHGC3-205ENST00000617641 ELL3Q9HB65 397 aaPredicted RBP15.05■□□□□ -0
PCDHGC3-205ENST00000617641 KCNK7Q9Y2U2 307 aa15.05■□□□□ -0
PCDHGC3-205ENST00000617641 MED12LQ86YW9 2145 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 XRCC2O43543 280 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 SSX5O60225 188 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 C1QBP02746 253 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 MGMTP16455 207 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 RAB1AP62820 205 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 RPS27AP62979 156 aaKnown RBP15.04■□□□□ -0
PCDHGC3-205ENST00000617641 HIKESHIQ53FT3 197 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 CLVS2Q5SYC1 327 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 FBXW9Q5XUX1 488 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 TMEM53Q6P2H8 277 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 GLDNQ6ZMI3 551 aaPredicted RBP15.04■□□□□ -0
PCDHGC3-205ENST00000617641 COLCA1Q6ZS62 124 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 PIAS4Q8N2W9 510 aaPredicted RBP15.04■□□□□ -0
PCDHGC3-205ENST00000617641 SPSB1Q96BD6 273 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 URM1Q9BTM9 101 aaKnown RBP15.04■□□□□ -0
PCDHGC3-205ENST00000617641 CLCF1Q9UBD9 225 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 GHRLQ9UBU3 117 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 PRRC2CQ9Y520 2896 aaKnown RBP15.04■□□□□ -0
PCDHGC3-205ENST00000617641 IGKV1-27A0A075B6S5 117 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 NRASP01111 189 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 CD74P04233 296 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 AMY2AP04746 511 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 RLN1P04808 185 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 SULT1A3P0DMM9 295 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 SULT1A4P0DMN0 295 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 HIST1H1DP16402 221 aaKnown RBP15.04■□□□□ -0
PCDHGC3-205ENST00000617641 IFITM2Q01629 132 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 OR8B8Q15620 311 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 TMEM42Q69YG0 159 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 OR52W1Q6IF63 320 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 OR56B1Q8NGI3 324 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 OR51T1Q8NGJ9 327 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 SPSB4Q96A44 273 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 S100A13Q99584 98 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 PLSCR3Q9NRY6 295 aa15.04■□□□□ -0
PCDHGC3-205ENST00000617641 ZNF107Q9UII5 783 aaPredicted RBP15.04■□□□□ -0
PCDHGC3-205ENST00000617641 PLATP00750 562 aa15.03■□□□□ -0
PCDHGC3-205ENST00000617641 CSN2P05814 226 aa15.03■□□□□ -0
PCDHGC3-205ENST00000617641 VSIG10L2P0DP72 767 aa15.03■□□□□ -0
PCDHGC3-205ENST00000617641 MPGP29372 298 aa15.03■□□□□ -0
PCDHGC3-205ENST00000617641 GZMKP49863 264 aa15.03■□□□□ -0
PCDHGC3-205ENST00000617641 MECP2P51608 486 aaKnown RBP15.03■□□□□ -0
PCDHGC3-205ENST00000617641 ZP1P60852 638 aa15.03■□□□□ -0
PCDHGC3-205ENST00000617641 CNN3Q15417 329 aaKnown RBP15.03■□□□□ -0
PCDHGC3-205ENST00000617641 GCNT2Q8N0V5 402 aa15.03■□□□□ -0
PCDHGC3-205ENST00000617641 OR5M9Q8NGP3 310 aa15.03■□□□□ -0
PCDHGC3-205ENST00000617641 OR1K1Q8NGR3 316 aa15.03■□□□□ -0
PCDHGC3-205ENST00000617641 GMPPAQ96IJ6 420 aaPredicted RBP15.03■□□□□ -0
PCDHGC3-205ENST00000617641 ARHGAP5-AS1Q96IT6 56 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms