RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CSTBP04080 98 aaKnown RBP11.69□□□□□ -0.54
MSH6-214ENST00000616033 ZNF84P51523 738 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 RPL27P61353 136 aaKnown RBP11.69□□□□□ -0.54
MSH6-214ENST00000616033 POU3F1Q03052 451 aaPredicted RBP11.69□□□□□ -0.54
MSH6-214ENST00000616033 ZNF117Q03924 483 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 CATSPERDQ86XM0 798 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 ZDHHC22Q8N966 263 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 RARRES2Q99969 163 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.69□□□□□ -0.54
MSH6-214ENST00000616033 TMEM100Q9NV29 134 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 FAM221AA4D161 298 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 ZNF217O75362 1048 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 MMP7P09237 267 aaPredicted RBP11.69□□□□□ -0.54
MSH6-214ENST00000616033 C5AR1P21730 350 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 CX3CR1P49238 355 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 RUNX3Q13761 415 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 ZNF385CQ66K41 422 aaPredicted RBP11.69□□□□□ -0.54
MSH6-214ENST00000616033 FAM166AQ6J272 317 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 BRICD5Q6PL45 260 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 TMEM182Q6ZP80 229 aaPredicted RBP11.69□□□□□ -0.54
MSH6-214ENST00000616033 KDF1Q8NAX2 398 aaPredicted RBP11.69□□□□□ -0.54
MSH6-214ENST00000616033 SUMF1Q8NBK3 374 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 BAHD1Q8TBE0 780 aaPredicted RBP11.69□□□□□ -0.54
MSH6-214ENST00000616033 ADAMTS18Q8TE60 1221 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 AQP3Q92482 292 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 TSLPQ969D9 159 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 RPP25Q9BUL9 199 aaKnown RBP11.69□□□□□ -0.54
MSH6-214ENST00000616033 SLC5A7Q9GZV3 580 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 POLE3Q9NRF9 147 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 PPP4R1LQ9P1A2 415 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 MEGF11A6BM72 1044 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 TSTD3H0UI37 97 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 PRAMEF26H0Y7S4 382 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 RAD51DO75771 328 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 SNU13P55769 128 aaKnown RBP11.69□□□□□ -0.54
MSH6-214ENST00000616033 HAGHQ16775 308 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 OR51T1Q8NGJ9 327 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 PARPBPQ9NWS1 579 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 MRPS28Q9Y2Q9 187 aaKnown RBP11.69□□□□□ -0.54
MSH6-214ENST00000616033 CBY1Q9Y3M2 126 aa11.69□□□□□ -0.54
MSH6-214ENST00000616033 FGF19O95750 216 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 CDAP32320 146 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 SPCS3P61009 180 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 SSBP1Q04837 148 aaKnown RBP11.68□□□□□ -0.54
MSH6-214ENST00000616033 HLA-DQA1Q5Y7H0 255 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 FLVCR1-AS1Q8TAF5 88 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 SLC37A2Q8TED4 501 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.68□□□□□ -0.54
MSH6-214ENST00000616033 ASB13Q8WXK3 278 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 PHYHO14832 338 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 SFT2D2O95562 160 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 IL2RAP01589 272 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 GP1BBP13224 206 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 GABRR1P24046 479 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 CHRFAM7AQ494W8 412 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 PLAC9Q5JTB6 97 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 C1orf53Q5VUE5 145 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 ZNF776Q68DI1 518 aaPredicted RBP11.68□□□□□ -0.54
MSH6-214ENST00000616033 WDR92Q96MX6 357 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 HDHD3Q9BSH5 251 aaPredicted RBP11.68□□□□□ -0.54
MSH6-214ENST00000616033 CNTNAP3Q9BZ76 1288 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 NMES1Q9C002 83 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 GAR1Q9NY12 217 aaKnown RBP11.68□□□□□ -0.54
MSH6-214ENST00000616033 KPTNQ9Y664 436 aa11.68□□□□□ -0.54
MSH6-214ENST00000616033 CDRT15L2A8MXV6 281 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 NPIPA5E9PKD4 350 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 MFNGO00587 321 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 MBPP02686 304 aaPredicted RBP11.67□□□□□ -0.54
MSH6-214ENST00000616033 APODP05090 189 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 FCGR3AP08637 254 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 KLK2P20151 261 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 HSD11B1P28845 292 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 PPP1CCP36873 323 aaKnown RBP11.67□□□□□ -0.54
MSH6-214ENST00000616033 PRTGQ2VWP7 1150 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 MAJINQ3KP22 176 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 C10orf91Q5T1B1 145 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 PEG10Q86TG7 708 aaKnown RBP11.67□□□□□ -0.54
MSH6-214ENST00000616033 C2orf50Q96LR7 162 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 SLC17A5Q9NRA2 495 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 NPIPA1Q9UND3 350 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 R4GMQ9 66 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 ESPL1Q14674 2120 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 DBX1A6NMT0 343 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 HKR1P10072 659 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 OPRM1P35372 400 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 SUPT4H1P63272 117 aaKnown RBP11.67□□□□□ -0.54
MSH6-214ENST00000616033 HNF4GQ14541 408 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 PHLDA2Q53GA4 152 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 PLXDC2Q6UX71 529 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 DMBX1Q8NFW5 382 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 FNDC9Q8TBE3 224 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 MRPL24Q96A35 216 aaKnown RBP11.67□□□□□ -0.54
MSH6-214ENST00000616033 TMEM59Q9BXS4 323 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 C8orf33Q9H7E9 229 aaPredicted RBP11.67□□□□□ -0.54
MSH6-214ENST00000616033 TMEM184BQ9Y519 407 aaPredicted RBP11.67□□□□□ -0.54
MSH6-214ENST00000616033 VPS13AQ96RL7 3174 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 NPIPB9F8W1W9 429 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 CD37P11049 281 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 SCAND1P57086 179 aa11.67□□□□□ -0.54
MSH6-214ENST00000616033 HGFACQ04756 655 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms