RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 SLC25A26Q70HW3 274 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 RIMS4Q9H426 269 aaPredicted RBP16.94■□□□□ 0.3
SPAST-203ENST00000615843 HYAL3O43820 417 aaPredicted RBP16.94■□□□□ 0.3
SPAST-203ENST00000615843 GSK3AP49840 483 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 KLF9Q13886 244 aaPredicted RBP16.94■□□□□ 0.3
SPAST-203ENST00000615843 TMEM183BQ1AE95 376 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 TMEM241Q24JQ0 296 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 ETFRF1Q6IPR1 90 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 TMEM65Q6PI78 240 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 ERGIC1Q969X5 290 aa16.94■□□□□ 0.3
SPAST-203ENST00000615843 SIRPB1O00241 398 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 THBS4P35443 961 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 NT5CQ8TCD5 201 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 GPR160Q9UJ42 338 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 C7orf66A4D0T2 115 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 M0R143 59 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 ZNF17P17021 662 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 VHLLQ6RSH7 139 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 C11orf40Q8WZ69 217 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 FAM173AQ9BQD7 235 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 FFAR1O14842 300 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 TCAPO15273 167 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 BCAT2O15382 392 aaPredicted RBP16.93■□□□□ 0.3
SPAST-203ENST00000615843 LANCL1O43813 399 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 DAOP14920 347 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 OR5AS1Q8N127 324 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 NINQ8N4C6 2090 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 IGHA1P01876 353 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 TBC1D28Q2M2D7 210 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 DRAM2Q6UX65 266 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 BHLHA9Q7RTU4 235 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 AGBL5Q8NDL9 886 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 OR5C1Q8NGR4 320 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 SHARPINQ9H0F6 387 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 A0A1W2PNV4 684 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 SPRY1O43609 319 aaPredicted RBP16.93■□□□□ 0.3
SPAST-203ENST00000615843 LY86O95711 162 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 PTBP3O95758 552 aaKnown RBP16.93■□□□□ 0.3
SPAST-203ENST00000615843 TMEM33P57088 247 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 HLA-DRB3P79483 266 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 ETFDHQ16134 617 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 C10orf111Q8N326 155 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 PP6455Q8WZ26 134 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 FAM122AQ96E09 287 aa16.93■□□□□ 0.3
SPAST-203ENST00000615843 TAF1P21675 1872 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 C7orf77A4D0Y5 90 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 MASP2O00187 686 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 GPANK1O95872 356 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 FCER1GP30273 86 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 CSNK1EP49674 416 aaKnown RBP16.92■□□□□ 0.3
SPAST-203ENST00000615843 FAHD2BQ6P2I3 314 aaPredicted RBP16.92■□□□□ 0.3
SPAST-203ENST00000615843 TMEM104Q8NE00 496 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 FAHD2AQ96GK7 314 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 POLDIP2Q9Y2S7 368 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 EVPLQ92817 2033 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 ADAP1O75689 374 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 CRHP06850 196 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 PNLIPRP2P54317 469 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 CHST6Q9GZX3 395 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 FRG2CA6NGY1 282 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 CD46P15529 392 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 ADGRG7Q96K78 797 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 UTP23Q9BRU9 249 aaKnown RBP16.92■□□□□ 0.3
SPAST-203ENST00000615843 SH2D1BO14796 132 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 LYSMD4Q5XG99 296 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 CDC20BQ86Y33 519 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 AMER3Q8N944 861 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 APH1AQ96BI3 265 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 TOX2Q96NM4 488 aa16.92■□□□□ 0.3
SPAST-203ENST00000615843 MYH14Q7Z406 1995 aaKnown RBP16.91■□□□□ 0.3
SPAST-203ENST00000615843 MUCL1Q96DR8 90 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 WDR34Q96EX3 536 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 LANCL2Q9NS86 450 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 MYO9BQ13459 2157 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 OGG1O15527 345 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 ERVFC1-1P60608 527 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 SLC25A30Q5SVS4 291 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 SIRT3Q9NTG7 399 aaPredicted RBP16.91■□□□□ 0.3
SPAST-203ENST00000615843 ZNF891A8MT65 544 aaPredicted RBP16.91■□□□□ 0.3
SPAST-203ENST00000615843 H0YIG0 161 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 IGHEP01854 428 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 GPR12P47775 334 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 CCL4L1Q8NHW4 92 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 DUSP13Q9UII6 198 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 NKX2-2O95096 273 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 PGA3P0DJD8 388 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 CASP6P55212 293 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 FZD2Q14332 565 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 ZNF273Q14593 569 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 GVQW1Q8N7I0 195 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 ZNF383Q8NA42 475 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 RASL12Q9NYN1 266 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 CCL27Q9Y4X3 112 aa16.91■□□□□ 0.3
SPAST-203ENST00000615843 RBFOX3A6NFN3 312 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 OR1D5P58170 312 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 YBX1P67809 324 aaKnown RBP16.9■□□□□ 0.3
SPAST-203ENST00000615843 IL13RA2Q14627 380 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 OVCH2Q7RTZ1 564 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 ZNF573Q86YE8 665 aa16.9■□□□□ 0.3
SPAST-203ENST00000615843 PTP4A1Q93096 173 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms