RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 DBTP11182 482 aaKnown RBP4.74□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF19P17023 458 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 MTNR1AP48039 350 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 RIPPLY3P57055 190 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 PAX2Q02962 417 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 ROM1Q03395 351 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 SLC35D3Q5M8T2 416 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 RUSC1-AS1Q66K80 236 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 KCTD8Q6ZWB6 473 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 PNKDQ8N490 385 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 OR8J1Q8NGP2 316 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 LRRC29Q8WV35 223 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 PELI1Q96FA3 418 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 SHARPINQ9H0F6 387 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 CLN6Q9NWW5 311 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 H2AFY2Q9P0M6 372 aaPredicted RBP4.74□□□□□ -1.65
CPNE3-208ENST00000614678 OR52A1Q9UKL2 312 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 KCNS2Q9ULS6 477 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 IGKV1-9A0A0C4DH69 117 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 MAGEA13PA6NCF6 341 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 IGLV3-1P01715 115 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 CSF3P09919 207 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 DCTDP32321 178 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 ATP6V1E1P36543 226 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 ETV1P50549 477 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 UTF1Q5T230 341 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 PHC2Q8IXK0 858 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 ZNRF1Q8ND25 227 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 OR5D18Q8NGL1 313 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 OR8S1Q8NH09 359 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 RHOXF1Q8NHV9 184 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 OR5P3Q8WZ94 311 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 RNF170Q96K19 258 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 YIPF3Q9GZM5 350 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 EGLN1Q9GZT9 426 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 C7orf69Q9H7B7 122 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 TNFRSF19Q9NS68 423 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 IMPAD1Q9NX62 359 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 WNK1Q9H4A3 2382 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 B4DSR2 109 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF732B4DXR9 585 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 LOC110117498-PIK3R3F6TDL0 507 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 GMDSO60547 372 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 VENTXO95231 258 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 SRD5A1P18405 259 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 DUSP1P28562 367 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 C21orf33P30042 268 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 AQP4P55087 323 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 SNU13P55769 128 aaKnown RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF404Q494X3 552 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 MOB3CQ70IA8 216 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF540Q8NDQ6 660 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 OR52I1Q8NGK6 324 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 OR14K1Q8NGZ2 314 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 RGP1Q92546 391 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF48Q96MX3 618 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 OCEL1Q9H607 264 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 PATZ1Q9HBE1 687 aaKnown RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 ERVK-18Q9QC07 812 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 PCDHB10Q9UN67 800 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 PPIAL4EA0A075B759 164 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 SLC22A31A6NKX4 558 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 PPIAL4DF5H284 164 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 TNFRSF13BO14836 293 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 TMPRSS2O15393 492 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 LHBP01229 141 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 PPIAL4FP0DN26 164 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 RPS2P15880 293 aaKnown RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 CD200P41217 278 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 RIDAP52758 137 aaKnown RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 IL5RAQ01344 420 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 HAGHLQ6PII5 290 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 KLBQ86Z14 1044 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 C17orf50Q8WW18 174 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 RAB1CQ92928 201 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 DACT3Q96B18 629 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 C1orf147Q96MC9 270 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 WACQ9BTA9 647 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 OR10A2Q9H208 303 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 MRPL15Q9P015 296 aaKnown RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 PPIAL4AQ9Y536 164 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 FAM230AA0A1W2PPH8 454 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 A0A1W2PPK0 400 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 LIMS3P0CW19 117 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 LIMS4P0CW20 117 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 TNFRSF1AP19438 455 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 NPBWR2P48146 333 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 GZMKP49863 264 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 ISL1P61371 349 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 MRPS11P82912 194 aaKnown RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 DGUOKQ16854 277 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 ZFP1Q6P2D0 407 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 CATSPERDQ86XM0 798 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 TPRX1Q8N7U7 411 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 TECTBQ96PL2 329 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 SLC6A7Q99884 636 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 CYSLTR2Q9NS75 346 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 PAK1IP1Q9NWT1 392 aaPredicted RBP4.73□□□□□ -1.65
CPNE3-208ENST00000614678 R4GMQ9 66 aa4.73□□□□□ -1.65
CPNE3-208ENST00000614678 ANKRD30BLA7E2S9 258 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms