RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 TRIM77I1YAP6 450 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 CYB5BO43169 146 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 DFFBO76075 338 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 CALCRP30988 508 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 ELLP55199 621 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 PP6455Q8WZ26 134 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 WDR89Q96FK6 387 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 DOK1Q99704 481 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 EPPINO95925 133 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 RAB1AP62820 205 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 PDCD1Q15116 288 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 RHBDD2Q6NTF9 364 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 FBXL14Q8N1E6 418 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 OR5M9Q8NGP3 310 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 NIPSNAP3BQ9BS92 247 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 ZNF355PQ9NSJ1 428 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 ZNF629Q9UEG4 869 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 ZNF816-ZNF321PA0A0X1KG74 233 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 LINC00862A6NCI5 91 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 SNRPGP15A8MWD9 76 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 ZNF354AO60765 605 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 C1QCP02747 245 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 ZNF92Q03936 586 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 SPANXN5Q5MJ07 72 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 PPP1R1CQ8WVI7 109 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 DAZAP1Q96EP5 407 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 C19orf12Q9NSK7 152 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 GAR1Q9NY12 217 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 ZNF638Q14966 1978 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 MPZL1O95297 269 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 SELEP16581 610 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 RPS23P62266 143 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 HES1Q14469 280 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 WFDC8Q8IUA0 241 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 OSR2Q8N2R0 312 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 MFSD4AQ8N468 514 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 SLC35G3Q8N808 338 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 OR1F12Q8NHA8 337 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 C14orf79Q96F83 325 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 VSTM2LQ96N03 204 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 FLRT3Q9NZU0 649 aa11.2□□□□□ -0.62
TNFAIP3-206ENST00000612899 hCG_1809904A0A1W2PP81 198 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 A0A1W2PPE2 198 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 A0A1W2PQF6 199 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 A0A1W2PR64 198 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 A0A1W2PRV1 198 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 MKRN2OSH3BPM6 223 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 LRP3O75074 770 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 ACSM4P0C7M7 580 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 TBPP20226 339 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 PIGPP57054 158 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 TRA2AQ13595 282 aaKnown RBP eCLIP11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 ETFDHQ16134 617 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 Q7L0L9 218 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 RBMXL3Q8N7X1 1067 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 GHRLQ9UBU3 117 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 R4GN57 208 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 OR13C7P0DN81 318 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 LGALS4P56470 323 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 ZNF718Q3SXZ3 478 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 FAM185AQ8N0U4 392 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 OR2AE1Q8NHA4 323 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 ZNF764Q96H86 408 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 SLC25A32Q9H2D1 315 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 RIMS4Q9H426 269 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 MT-CO3P00414 261 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 POU2F2P09086 479 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 AVPR2P30518 371 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 SPEM2Q0P670 501 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 GCNT2Q8N0V5 402 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 ARHGEF39Q8N4T4 335 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 BSCL2Q96G97 398 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 UHRF2Q96PU4 802 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 FAM173AQ9BQD7 235 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 CFHR5Q9BXR6 569 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 MAGT1Q9H0U3 335 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 FOXJ3Q9UPW0 622 aa11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 COL11A2P13942 1736 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-206ENST00000612899 TRGV5A0A0B4J1U4 118 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 LRP5LA4QPB2 252 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 M0R1B8 84 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 MVDP53602 400 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 ZNF85Q03923 595 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 CMBLQ96DG6 245 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 EXOGQ9Y2C4 368 aaKnown RBP11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 ATP23Q9Y6H3 246 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 CACNA1GO43497 2377 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 NPIPB8E9PQR5 432 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 NME2P1O60361 137 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 CD80P33681 288 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 TMEM182Q6ZP80 229 aaPredicted RBP11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 SLC16A13Q7RTY0 426 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 LIN37Q96GY3 246 aaPredicted RBP11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 C20orf24Q9BUV8 137 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 FBXO4Q9UKT5 387 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 CCDC88CQ9P219 2028 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 CYR61O00622 381 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 JTBO76095 146 aa11.18□□□□□ -0.62
TNFAIP3-206ENST00000612899 H2AFB1P0C5Y9 115 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms