RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 SYT13Q7L8C5 426 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 ZNF441Q8N8Z8 693 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 MVB12AQ96EY5 273 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 REEP6Q96HR9 211 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 UCN2Q96RP3 112 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 B3GALT5Q9Y2C3 310 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 LRP4O75096 1905 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 A0A0A6YYH2 397 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 A6NJ64 397 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 XRCC2O43543 280 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 SCRG1O75711 98 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 DIRAS3O95661 229 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 ACY1Q03154 408 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 SPAG16Q8N0X2 631 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 ZNF837Q96EG3 531 aaPredicted RBP12.38□□□□□ -0.43
COL6A1-207ENST00000612273 GPR132Q9UNW8 380 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 PI4KAP42356 2102 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 GPR179Q6PRD1 2367 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 F10P00742 488 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 MUC1P15941 1255 aaPredicted RBP12.38□□□□□ -0.43
COL6A1-207ENST00000612273 PPT1P50897 306 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 D2HGDHQ8N465 521 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 POC1BQ8TC44 478 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 ST8SIA1Q92185 356 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 URM1Q9BTM9 101 aaKnown RBP12.38□□□□□ -0.43
COL6A1-207ENST00000612273 GPR173Q9NS66 373 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 ZNF407Q9C0G0 2248 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 SIGLEC6O43699 453 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 DAOP14920 347 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 PDZK1IP1Q13113 114 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 PHF19Q5T6S3 580 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 NOXO1Q8NFA2 376 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 ZNF385AQ96PM9 386 aaKnown RBP12.37□□□□□ -0.43
COL6A1-207ENST00000612273 RTBDNQ9BSG5 229 aaPredicted RBP12.37□□□□□ -0.43
COL6A1-207ENST00000612273 RHOFQ9HBH0 211 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 CYTL1Q9NRR1 136 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 PLEKHJ1Q9NW61 149 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 ALKBH4Q9NXW9 302 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 SLC2A8Q9NY64 477 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 PLEK2Q9NYT0 353 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 ITGA3P26006 1051 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 LPAR6P43657 344 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 ZNF616Q08AN1 781 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 PHLDA2Q53GA4 152 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 RAET1LQ5VY80 246 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 STOML3Q8TAV4 291 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 ZNF2Q9BSG1 426 aaPredicted RBP12.37□□□□□ -0.43
COL6A1-207ENST00000612273 DEFB126Q9BYW3 111 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 PIGLQ9Y2B2 252 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 B3GALT1Q9Y5Z6 326 aa12.37□□□□□ -0.43
COL6A1-207ENST00000612273 TTLL8A6PVC2 850 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 TRAF3IP2O43734 574 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-207ENST00000612273 C1QL1O75973 258 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 SFT2D2O95562 160 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 IGHMP01871 453 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 PGA4P0DJD7 388 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 PGA3P0DJD8 388 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 FOSL2P15408 326 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 CFPP27918 469 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 FHITP49789 147 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 NXPH1P58417 271 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 RIPPLY1Q0D2K3 151 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 THEM4Q5T1C6 240 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 DEGS2Q6QHC5 323 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 C1orf147Q96MC9 270 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-207ENST00000612273 UQCC2Q9BRT2 126 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 TAF9BQ9HBM6 251 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 UQCC1Q9NVA1 299 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 NBEAQ8NFP9 2946 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 DHRS7CA6NNS2 312 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 HPNP05981 417 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 RBMXP38159 391 aaKnown RBP12.36□□□□□ -0.43
COL6A1-207ENST00000612273 PTGFRP43088 359 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 P2RY4P51582 365 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 UBE2V2Q15819 145 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 PLPPR5Q32ZL2 321 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 PABPC1L2AQ5JQF8 200 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 GUSBP11Q6P575 273 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 LINC00518Q8N0U6 118 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 DTWD2Q8NBA8 298 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 OR56B1Q8NGI3 324 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 FAAP24Q9BTP7 215 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 SPP1P10451 314 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 NOVA1P51513 510 aaKnown RBP12.36□□□□□ -0.43
COL6A1-207ENST00000612273 CEBPGP53567 150 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 PCK2Q16822 640 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 PHYHD1Q5SRE7 291 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 ZNF574Q6ZN55 896 aaPredicted RBP12.36□□□□□ -0.43
COL6A1-207ENST00000612273 C5orf24Q7Z6I8 188 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 ISOC2Q96AB3 205 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 AKR1E2Q96JD6 320 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 GPHA2Q96T91 129 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 MRPL13Q9BYD1 178 aaKnown RBP12.36□□□□□ -0.43
COL6A1-207ENST00000612273 MYOTQ9UBF9 498 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 NXT1Q9UKK6 140 aaKnown RBP12.36□□□□□ -0.43
COL6A1-207ENST00000612273 MCTS1Q9ULC4 181 aaKnown RBP12.36□□□□□ -0.43
COL6A1-207ENST00000612273 NUP210LQ5VU65 1888 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 TMEM131Q92545 1883 aa12.36□□□□□ -0.43
COL6A1-207ENST00000612273 ZNF850A8MQ14 1090 aa12.35□□□□□ -0.43
COL6A1-207ENST00000612273 C9JQL5 133 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms