RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 IL22RA1Q8N6P7 574 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 ADAD2Q8NCV1 583 aaKnown RBP7.7□□□□□ -1.18
LIG4-204ENST00000611712 BPIFCQ8NFQ6 507 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 AKR7LQ8NHP1 331 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 RPS4Y2Q8TD47 263 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 ZNF845Q96IR2 970 aaPredicted RBP7.7□□□□□ -1.18
LIG4-204ENST00000611712 KLHDC3Q9BQ90 382 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 RAB33BQ9H082 229 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 NELFAQ9H3P2 528 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 PIPOXQ9P0Z9 390 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 NOSIPQ9Y314 301 aaKnown RBP7.7□□□□□ -1.18
LIG4-204ENST00000611712 HELZP42694 1942 aaKnown RBP7.7□□□□□ -1.18
LIG4-204ENST00000611712 A0A087WZY1 265 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 C1orf196B1AJZ1 125 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 CER1O95813 267 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 ZP4Q12836 540 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 DCAF12Q5T6F0 453 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 ZNF660Q6AZW8 331 aaPredicted RBP7.7□□□□□ -1.18
LIG4-204ENST00000611712 TMEM65Q6PI78 240 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 OR1S2Q8NGQ3 325 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 OR13C8Q8NGS7 320 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 SCGB1C1Q8TD33 95 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 FAM131CQ96AQ9 280 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 REEP6Q96HR9 211 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 KCNK17Q96T54 332 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 ZNF107Q9UII5 783 aaPredicted RBP7.7□□□□□ -1.18
LIG4-204ENST00000611712 MCTS1Q9ULC4 181 aaKnown RBP7.7□□□□□ -1.18
LIG4-204ENST00000611712 BOKQ9UMX3 212 aaPredicted RBP7.7□□□□□ -1.18
LIG4-204ENST00000611712 KCNK7Q9Y2U2 307 aa7.7□□□□□ -1.18
LIG4-204ENST00000611712 RAB27BO00194 218 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 SFT2D2O95562 160 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 NRASP01111 189 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 IFNA5P01569 189 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 SERPINE2P07093 398 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 FPR2P25090 351 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 RPL12P30050 165 aaKnown RBP7.69□□□□□ -1.18
LIG4-204ENST00000611712 FCGR2CP31995 323 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 CD80P33681 288 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 PRSS12P56730 875 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 RPS18P62269 152 aaKnown RBP7.69□□□□□ -1.18
LIG4-204ENST00000611712 FHL1Q13642 323 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 MICBQ29980 383 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 C2orf68Q2NKX9 166 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 C6orf201Q7Z4U5 140 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 SLC25A45Q8N413 288 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 SUMF1Q8NBK3 374 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 OR51F2Q8NH61 342 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 OR2AE1Q8NHA4 323 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 CPT1CQ8TCG5 803 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 MITD1Q8WV92 249 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 IL1F10Q8WWZ1 152 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 SLAMF9Q96A28 289 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 GPR160Q9UJ42 338 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 IGKV3D-11A0A0A0MRZ8 115 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 TRAPPC2LH3BP13 241 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 DHRS3O75911 302 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 CNOT4O95628 575 aaKnown RBP7.69□□□□□ -1.18
LIG4-204ENST00000611712 CRHP06850 196 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 NHLRC3Q5JS37 347 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 C1orf100Q5SVJ3 147 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 FNDC7Q5VTL7 733 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 FAHD2BQ6P2I3 314 aaPredicted RBP7.69□□□□□ -1.18
LIG4-204ENST00000611712 SLC22A25Q6T423 547 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 LGI3Q8N145 548 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 TMEM104Q8NE00 496 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 OR2I1PQ8NGU4 316 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 ROBO4Q8WZ75 1007 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 PTX4Q96A99 478 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 FAHD2AQ96GK7 314 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 CALHM2Q9HA72 323 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 A0A1W2PP11 408 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 OR2M5A3KFT3 312 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 CBR3O75828 277 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 ZNF44P15621 663 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 EPHA8P29322 1005 aaPredicted RBP7.69□□□□□ -1.18
LIG4-204ENST00000611712 CYB561P49447 251 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 DSCR4P56555 118 aaPredicted RBP7.69□□□□□ -1.18
LIG4-204ENST00000611712 PIGPP57054 158 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 RAB32Q13637 225 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 CLINT1Q14677 625 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 ZNF260Q3ZCT1 412 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 SLC36A1Q7Z2H8 476 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 STX12Q86Y82 276 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 OR6S1Q8NH40 331 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 SGCZQ96LD1 299 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 CRLF2Q9HC73 371 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 NPTNQ9Y639 398 aa7.69□□□□□ -1.18
LIG4-204ENST00000611712 FTCDNL1E5RQL4 147 aa7.68□□□□□ -1.18
LIG4-204ENST00000611712 KCNAB3O43448 404 aa7.68□□□□□ -1.18
LIG4-204ENST00000611712 ISG15P05161 165 aa7.68□□□□□ -1.18
LIG4-204ENST00000611712 IKZF1Q13422 519 aa7.68□□□□□ -1.18
LIG4-204ENST00000611712 PLPPR5Q32ZL2 321 aa7.68□□□□□ -1.18
LIG4-204ENST00000611712 SP6Q3SY56 376 aa7.68□□□□□ -1.18
LIG4-204ENST00000611712 SMUG1Q53HV7 270 aa7.68□□□□□ -1.18
LIG4-204ENST00000611712 AKR1C8PQ5T2L2 129 aa7.68□□□□□ -1.18
LIG4-204ENST00000611712 CLEC18BQ6UXF7 455 aa7.68□□□□□ -1.18
LIG4-204ENST00000611712 HEATR5AQ86XA9 2040 aa7.68□□□□□ -1.18
LIG4-204ENST00000611712 FAM219AQ8IW50 185 aa7.68□□□□□ -1.18
LIG4-204ENST00000611712 RTN4IP1Q8WWV3 396 aaPredicted RBP7.68□□□□□ -1.18
LIG4-204ENST00000611712 RRNAD1Q96FB5 475 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms