RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 GNPNAT1Q96EK6 184 aaPredicted RBP11.09□□□□□ -0.63
CDH1-212ENST00000611625 CCDC74BQ96LY2 380 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 TSTD3H0UI37 97 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 SPRY1O43609 319 aaPredicted RBP11.09□□□□□ -0.63
CDH1-212ENST00000611625 NDUFA6P56556 154 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 PJVKQ0ZLH3 352 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 SEZ6L2Q6UXD5 910 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 HIST2H3AQ71DI3 136 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 BVESQ8NE79 360 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 ASB5Q8WWX0 329 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 PRRX2Q99811 253 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 NIT2Q9NQR4 276 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 KCNE5Q9UJ90 142 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 PILRAQ9UKJ1 303 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 H7C1Q1 480 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 PTGFRP43088 359 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 CATSPERDQ86XM0 798 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 OSR2Q8N2R0 312 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 OR5M9Q8NGP3 310 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 ALKBH3Q96Q83 286 aaPredicted RBP11.09□□□□□ -0.63
CDH1-212ENST00000611625 PLK3Q9H4B4 646 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 TMEM100Q9NV29 134 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 ZNF230Q9UIE0 474 aaPredicted RBP11.09□□□□□ -0.63
CDH1-212ENST00000611625 WDR81Q562E7 1941 aa11.09□□□□□ -0.63
CDH1-212ENST00000611625 FIGNL2A6NMB9 653 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 TNFSF11O14788 317 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 SSSCA1O60232 199 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 CSF2RBP32927 897 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 OR3A4PP47883 348 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 SMAD4Q13485 552 aaKnown RBP11.08□□□□□ -0.64
CDH1-212ENST00000611625 RAB32Q13637 225 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 NAA40Q86UY6 237 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 SPEM1Q8N4L4 309 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 ZNF485Q8NCK3 441 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 AKR7LQ8NHP1 331 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 SPSB1Q96BD6 273 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 UBE2ZQ9H832 354 aaPredicted RBP11.08□□□□□ -0.64
CDH1-212ENST00000611625 LRP5LA4QPB2 252 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 HS3ST1O14792 307 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 OR2C1O95371 312 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 BGLAPP02818 100 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 GLRA1P23415 457 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 RAB11AP62491 216 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 MZT1Q08AG7 82 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 LTC4SQ16873 150 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 FAM209AQ5JX71 171 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 ZNF362Q5T0B9 420 aaPredicted RBP11.08□□□□□ -0.64
CDH1-212ENST00000611625 CST9LP1Q5W188 147 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.08□□□□□ -0.64
CDH1-212ENST00000611625 OR11G2Q8NGC1 345 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 PTPMT1Q8WUK0 201 aaPredicted RBP11.08□□□□□ -0.64
CDH1-212ENST00000611625 ASB10Q8WXI3 467 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 RDH5Q92781 318 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 MCHR2Q969V1 340 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 PCED1AQ9H1Q7 454 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 PRELID3BQ9Y3B1 194 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 SHISA3A0PJX4 238 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 OR6C6A6NF89 314 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 FAM166BA8MTA8 275 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 ZNF705GA8MUZ8 300 aaPredicted RBP11.08□□□□□ -0.64
CDH1-212ENST00000611625 RNASEK-C17orf49H0YIS7 233 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 DEGS1O15121 323 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 CDC14BO60729 498 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 HAGHQ16775 308 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 FAHD2BQ6P2I3 314 aaPredicted RBP11.08□□□□□ -0.64
CDH1-212ENST00000611625 OR5AP2Q8NGF4 316 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 APOBEC4Q8WW27 367 aaKnown RBP11.08□□□□□ -0.64
CDH1-212ENST00000611625 FAHD2AQ96GK7 314 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 SUCNR1Q9BXA5 334 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 GCM1Q9NP62 436 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 MYOTQ9UBF9 498 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 RP1P56715 2156 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 IGHV1OR15-9A0A0B4J2B8 117 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 PPP1R2P9O14990 202 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 SEMA7AO75326 666 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 CST4P01036 141 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 BCKDHBP21953 392 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 BAXQ07812 192 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 ANKRD37Q7Z713 158 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 FBXL14Q8N1E6 418 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 MMP26Q9NRE1 261 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 GFOD1Q9NXC2 390 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 GNG12Q9UBI6 72 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 ZMIZ1Q9ULJ6 1067 aa11.08□□□□□ -0.64
CDH1-212ENST00000611625 UNC13CQ8NB66 2214 aa11.07□□□□□ -0.64
CDH1-212ENST00000611625 A8MXE2 369 aa11.07□□□□□ -0.64
CDH1-212ENST00000611625 CBR3O75828 277 aa11.07□□□□□ -0.64
CDH1-212ENST00000611625 AGFG1P52594 562 aaKnown RBP11.07□□□□□ -0.64
CDH1-212ENST00000611625 SP6Q3SY56 376 aa11.07□□□□□ -0.64
CDH1-212ENST00000611625 PRSS54Q6PEW0 395 aa11.07□□□□□ -0.64
CDH1-212ENST00000611625 CARFQ8N187 725 aa11.07□□□□□ -0.64
CDH1-212ENST00000611625 CADM4Q8NFZ8 388 aa11.07□□□□□ -0.64
CDH1-212ENST00000611625 ZNF705FA8MVS1 300 aaPredicted RBP11.07□□□□□ -0.64
CDH1-212ENST00000611625 DHRS3O75911 302 aa11.07□□□□□ -0.64
CDH1-212ENST00000611625 ZNF705DP0CH99 300 aaPredicted RBP11.07□□□□□ -0.64
CDH1-212ENST00000611625 ZNF705BP0CI00 300 aaPredicted RBP11.07□□□□□ -0.64
CDH1-212ENST00000611625 EDN3P14138 238 aa11.07□□□□□ -0.64
CDH1-212ENST00000611625 TESK1Q15569 626 aa11.07□□□□□ -0.64
CDH1-212ENST00000611625 MAGT1Q9H0U3 335 aa11.07□□□□□ -0.64
CDH1-212ENST00000611625 PLSCR5A0PG75 271 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms