RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 PLCXD3Q63HM9 321 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 WDR82Q6UXN9 313 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 DCDC5Q6ZRR9 648 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 MOB3CQ70IA8 216 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 RHOUQ7L0Q8 258 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 FAM90A1Q86YD7 464 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 ZDHHC23Q8IYP9 409 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 PQLC1Q8N2U9 271 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 FTMTQ8N4E7 242 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 SPERTQ8NA61 448 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 OR8J1Q8NGP2 316 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 STMN2Q93045 179 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 ERGIC1Q969X5 290 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 RNF170Q96K19 258 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 MRI1Q9BV20 369 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 C19orf24Q9BVV8 132 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 USE1Q9NZ43 259 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 WARS2Q9UGM6 360 aaKnown RBP12.08□□□□□ -0.48
HDDC2-204ENST00000608295 NUFIP1Q9UHK0 495 aaKnown RBP12.08□□□□□ -0.48
HDDC2-204ENST00000608295 PIGLQ9Y2B2 252 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 R4GMQ9 66 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 COL6A5A8TX70 2615 aa12.08□□□□□ -0.48
HDDC2-204ENST00000608295 TRAV40A0A0B4J280 105 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 IGHV2-70DA0A0C4DH43 119 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 ZNF816-ZNF321PA0A0X1KG74 233 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 A8MXK9 166 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 C22orf46C9J442 243 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 J3QLI3 93 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 PHYHO14832 338 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 AKR7A2O43488 359 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 ENTPD6O75354 484 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 SELLP14151 372 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 MAP2K3P46734 347 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 IL5RAQ01344 420 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 LRRC36Q1X8D7 754 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 WDR25Q64LD2 544 aaPredicted RBP12.07□□□□□ -0.48
HDDC2-204ENST00000608295 C11orf53Q8IXP5 236 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 BPIFB2Q8N4F0 458 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 FAM216BQ8N7L0 139 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 OR5T2Q8NGG2 359 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 NANPQ8TBE9 248 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 NPRL2Q8WTW4 380 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 OR5P3Q8WZ94 311 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 ST8SIA4Q92187 359 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 CCL13Q99616 98 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 SLC29A1Q99808 456 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 NUDT16L1Q9BRJ7 211 aaKnown RBP12.07□□□□□ -0.48
HDDC2-204ENST00000608295 WDR13Q9H1Z4 485 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 GPR173Q9NS66 373 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.07□□□□□ -0.48
HDDC2-204ENST00000608295 DNAJB11Q9UBS4 358 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 GNG8Q9UK08 70 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 OR52A1Q9UKL2 312 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 GMPPBQ9Y5P6 360 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 INSIG2Q9Y5U4 225 aa12.07□□□□□ -0.48
HDDC2-204ENST00000608295 TRAV38-1A0A0B4J264 116 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 ZNF732B4DXR9 585 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 TMPRSS2O15393 492 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 ZNF254O75437 659 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 SRSF10O75494 262 aaKnown RBP12.06□□□□□ -0.48
HDDC2-204ENST00000608295 PTBP3O95758 552 aaKnown RBP12.06□□□□□ -0.48
HDDC2-204ENST00000608295 GATA3P23771 443 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 IKZF1Q13422 519 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 WDR38Q5JTN6 314 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 DEGS2Q6QHC5 323 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 BTNL3Q6UXE8 466 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 BCL6BQ8N143 479 aaPredicted RBP12.06□□□□□ -0.48
HDDC2-204ENST00000608295 SCCPDHQ8NBX0 429 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 SEMA6DQ8NFY4 1073 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 TRMT10AQ8TBZ6 339 aaKnown RBP12.06□□□□□ -0.48
HDDC2-204ENST00000608295 RNFT2Q96EX2 444 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 DUX5Q96PT3 197 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 HIST1H2AAQ96QV6 131 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 C9orf16Q9BUW7 83 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 ACOXLQ9NUZ1 547 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 MPC1Q9Y5U8 109 aa12.06□□□□□ -0.48
HDDC2-204ENST00000608295 SOX21Q9Y651 276 aaPredicted RBP12.06□□□□□ -0.48
HDDC2-204ENST00000608295 A0A0U1RQV5 110 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.05□□□□□ -0.48
HDDC2-204ENST00000608295 FCN3O75636 299 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 RHBDL1O75783 438 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 CST4P01036 141 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 IGHV4-38-2P0DP08 117 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 ZNF85Q03923 595 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 EGR3Q06889 387 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 RIPPLY1Q0D2K3 151 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 KLF17Q5JT82 389 aaPredicted RBP12.05□□□□□ -0.48
HDDC2-204ENST00000608295 LIPNQ5VXI9 398 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 ZBTB49Q6ZSB9 765 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 FAM220AQ7Z4H9 259 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 GALNT4Q8N4A0 578 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.05□□□□□ -0.48
HDDC2-204ENST00000608295 ZNF418Q8TF45 676 aaPredicted RBP12.05□□□□□ -0.48
HDDC2-204ENST00000608295 HRASLS5Q96KN8 279 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 ZNF488Q96MN9 340 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 PCGF1Q9BSM1 259 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 MOB1AQ9H8S9 216 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 ERVK-18Q9QC07 812 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 ZNF69Q9UC07 566 aa12.05□□□□□ -0.48
HDDC2-204ENST00000608295 DVL1O14640 695 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms