RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 GOLGA7Q7Z5G4 137 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 FAM126BQ8IXS8 530 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 LINC01561Q8N1V8 128 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 OR7G2Q8NG99 324 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 OR51S1Q8NGJ8 323 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 OR5L1Q8NGL2 311 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 OR5P2Q8WZ92 322 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 ARL11Q969Q4 196 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 GALNT14Q96FL9 552 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 IL17FQ96PD4 163 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 OR52E6Q96RD3 313 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 FAIM2Q9BWQ8 316 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 GABARAPL1Q9H0R8 117 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 UBQLN4Q9NRR5 601 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 UQCC1Q9NVA1 299 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 CCDC167Q9P0B6 97 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 KBTBD11-OT1A0A1B0GTJ5 212 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF705EA8MWA4 302 aaPredicted RBP4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 APOC4-APOC2K7ER74 178 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 CHST1O43916 411 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 APOC2P02655 101 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 VTNP04004 478 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 TYMSP04818 313 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 ETFAP13804 333 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 HTR1EP28566 365 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 BTCP35070 178 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 RFX3P48380 749 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 TTPAP49638 278 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 CDKN2DP55273 166 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 TMEM241Q24JQ0 296 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 ODF4Q2M2E3 257 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 C9orf135Q5VTT2 229 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 AGBL4Q5VU57 503 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 TSEN54Q7Z6J9 526 aaKnown RBP4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 SERPINA11Q86U17 422 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 NOXO1Q8NFA2 376 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 GJC3Q8NFK1 279 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 OR4S1Q8NGB4 309 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 ABHD4Q8TB40 342 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 ASB13Q8WXK3 278 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 VOPP1Q96AW1 172 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 AJUBAQ96IF1 538 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 GPR22Q99680 433 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 RHNO1Q9BSD3 238 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 RDH14Q9HBH5 336 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 CLN8Q9UBY8 286 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 PLA2G2DQ9UNK4 145 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 KLHDC2Q9Y2U9 406 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 COQ4Q9Y3A0 265 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 UFC1Q9Y3C8 167 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 FLVCR1Q9Y5Y0 555 aa4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 SPIN1Q9Y657 262 aaPredicted RBP4.4□□□□□ -1.7
SPTBN1-206ENST00000602898 A0A087X1B8 175 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 TRAV39A0A0B4J263 110 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 TMEM213A2RRL7 107 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 OR2M5A3KFT3 312 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 SULT2B1O00204 365 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 ARPC1BO15143 372 aaKnown RBP4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 MPZL2O60487 215 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 OR2A4O95047 310 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 MPZL1O95297 269 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 FARS2O95363 451 aaKnown RBP4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 SELEP16581 610 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 SDC1P18827 310 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 CHRNB4P30926 498 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 GPR1P46091 355 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 TCL1AP56279 114 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 MRPS34P82930 218 aaKnown RBP4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 ITPK1Q13572 414 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 RPEL1Q2QD12 228 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 SAMD13Q5VXD3 122 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 OR10K2Q6IF99 312 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF534Q76KX8 674 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 C6orf120Q7Z4R8 191 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 CMC1Q7Z7K0 106 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 CMTM1Q8IZ96 169 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 SLC38A9Q8NBW4 561 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 MOB3AQ96BX8 217 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 MCEEQ96PE7 176 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 OR2A7Q96R45 310 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 TP53RKQ96S44 253 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 SEPHS2Q99611 448 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 PITX2Q99697 317 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 NRIP2Q9BQI9 281 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 SPRTNQ9H040 489 aaPredicted RBP4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 ADGRL4Q9HBW9 690 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 RLIMQ9NVW2 624 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 IL17CQ9P0M4 197 aa4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 DDX60LQ5H9U9 1706 aaKnown RBP4.4□□□□□ -1.71
SPTBN1-206ENST00000602898 ANKRD20A5PA0PJZ0 165 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 LRRC30A6NM36 301 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 GJE1A6NN92 205 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 PLPP1O14494 284 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 PLPP3O14495 311 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 IRF1P10914 325 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 HRH2P25021 359 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 PSMA1P25786 263 aaKnown RBP4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 ZNF140P52738 457 aaPredicted RBP4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 CTBP2P56545 445 aa4.39□□□□□ -1.71
SPTBN1-206ENST00000602898 OR10A3P58181 314 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms