RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 FAM76BQ5HYJ3 339 aa14.33□□□□□ -0.12
HERC3-214ENST00000601319 WDR25Q64LD2 544 aaPredicted RBP14.33□□□□□ -0.12
HERC3-214ENST00000601319 LYPD2Q6UXB3 125 aa14.33□□□□□ -0.12
HERC3-214ENST00000601319 WDR82Q6UXN9 313 aa14.33□□□□□ -0.12
HERC3-214ENST00000601319 ZNF841Q6ZN19 808 aa14.33□□□□□ -0.12
HERC3-214ENST00000601319 USP43Q70EL4 1123 aa14.33□□□□□ -0.12
HERC3-214ENST00000601319 FAM90A1Q86YD7 464 aa14.33□□□□□ -0.12
HERC3-214ENST00000601319 ZDHHC23Q8IYP9 409 aa14.33□□□□□ -0.12
HERC3-214ENST00000601319 OR2T27Q8NH04 317 aa14.33□□□□□ -0.12
HERC3-214ENST00000601319 HPSE2Q8WWQ2 592 aa14.33□□□□□ -0.12
HERC3-214ENST00000601319 APOL4Q9BPW4 351 aa14.33□□□□□ -0.12
HERC3-214ENST00000601319 C9orf16Q9BUW7 83 aa14.33□□□□□ -0.12
HERC3-214ENST00000601319 GPR84Q9NQS5 396 aa14.33□□□□□ -0.12
HERC3-214ENST00000601319 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.33□□□□□ -0.12
HERC3-214ENST00000601319 AUP1Q9Y679 476 aa14.33□□□□□ -0.12
HERC3-214ENST00000601319 DHRS7CA6NNS2 312 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 ZNF850A8MQ14 1090 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 SRRM5B3KS81 715 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 C3orf80F5H4A9 247 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.32□□□□□ -0.12
HERC3-214ENST00000601319 DHRS3O75911 302 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 KRT8P05787 483 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 MUC1P15941 1255 aaPredicted RBP14.32□□□□□ -0.12
HERC3-214ENST00000601319 EGR1P18146 543 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 SNRPGP62308 76 aaKnown RBP14.32□□□□□ -0.12
HERC3-214ENST00000601319 CSNK2BP67870 215 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 HOXA4Q00056 320 aaPredicted RBP14.32□□□□□ -0.12
HERC3-214ENST00000601319 PAX8Q06710 450 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 C11orf91Q3C1V1 193 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 ZNF684Q5T5D7 378 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 BCL2L15Q5TBC7 163 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 BTNL3Q6UXE8 466 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 Q6ZSR3 168 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 SSX6Q7RTT6 188 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 COMMD2Q86X83 199 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 ELMOD2Q8IZ81 293 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 PQLC1Q8N2U9 271 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 C19orf18Q8NEA5 215 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 SEMA6DQ8NFY4 1073 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 OR10Z1Q8NGY1 313 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 OR51E1Q8TCB6 317 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 LRRC29Q8WV35 223 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 RAB40AQ8WXH6 277 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 C12orf43Q96C57 262 aaKnown RBP14.32□□□□□ -0.12
HERC3-214ENST00000601319 KAAG1Q9UBP8 84 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 CTSZQ9UBR2 303 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 SNX5Q9Y5X3 404 aa14.32□□□□□ -0.12
HERC3-214ENST00000601319 A0A1W2PQL4 384 aaPredicted RBP14.31□□□□□ -0.12
HERC3-214ENST00000601319 MTRF1O75570 445 aaKnown RBP14.31□□□□□ -0.12
HERC3-214ENST00000601319 SULT1C4O75897 302 aa14.31□□□□□ -0.12
HERC3-214ENST00000601319 RIPPLY1Q0D2K3 151 aa14.31□□□□□ -0.12
HERC3-214ENST00000601319 OCLNQ16625 522 aa14.31□□□□□ -0.12
HERC3-214ENST00000601319 TUSC1Q2TAM9 212 aa14.31□□□□□ -0.12
HERC3-214ENST00000601319 ARMCX4Q5H9R4 360 aa14.31□□□□□ -0.12
HERC3-214ENST00000601319 MEDAGQ5VYS4 303 aa14.31□□□□□ -0.12
HERC3-214ENST00000601319 SFRP4Q6FHJ7 346 aaPredicted RBP14.31□□□□□ -0.12
HERC3-214ENST00000601319 BOLLQ8N9W6 283 aaKnown RBP14.31□□□□□ -0.12
HERC3-214ENST00000601319 ZNF418Q8TF45 676 aaPredicted RBP14.31□□□□□ -0.12
HERC3-214ENST00000601319 ZFAND2BQ8WV99 257 aa14.31□□□□□ -0.12
HERC3-214ENST00000601319 PIGCQ92535 297 aa14.31□□□□□ -0.12
HERC3-214ENST00000601319 MBOAT4Q96T53 435 aa14.31□□□□□ -0.12
HERC3-214ENST00000601319 FGF23Q9GZV9 251 aaPredicted RBP14.31□□□□□ -0.12
HERC3-214ENST00000601319 OCEL1Q9H607 264 aa14.31□□□□□ -0.12
HERC3-214ENST00000601319 OR52A1Q9UKL2 312 aa14.31□□□□□ -0.12
HERC3-214ENST00000601319 TENM1Q9UKZ4 2725 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 KIR2DS1A0A191URI9 304 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 OR5B21A6NL26 309 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 CDIPTO14735 213 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 MAGEB4O15481 346 aaPredicted RBP14.3□□□□□ -0.12
HERC3-214ENST00000601319 ADAM20O43506 726 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 CCL1P22362 96 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 MTNR1AP48039 350 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 HILS1P60008 231 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 ISL1P61371 349 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 GNG3P63215 75 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 ACTC1P68032 377 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 ACTA1P68133 377 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 MICBQ29980 383 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 CEACAM21Q3KPI0 293 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 OR10H4Q8NGA5 316 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 UPRTQ96BW1 309 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 RNF170Q96K19 258 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 FAM71F1Q96KD3 344 aaPredicted RBP14.3□□□□□ -0.12
HERC3-214ENST00000601319 HIST1H2AAQ96QV6 131 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 TBX5Q99593 518 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 C19orf24Q9BVV8 132 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.3□□□□□ -0.12
HERC3-214ENST00000601319 ERVK-18Q9QC07 812 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 ENPP5Q9UJA9 477 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 V9GYS6 101 aa14.3□□□□□ -0.12
HERC3-214ENST00000601319 METTL15A6NJ78 407 aa14.29□□□□□ -0.12
HERC3-214ENST00000601319 ENSAO43768 121 aaKnown RBP14.29□□□□□ -0.12
HERC3-214ENST00000601319 APOL3O95236 402 aa14.29□□□□□ -0.12
HERC3-214ENST00000601319 FAHP16930 419 aa14.29□□□□□ -0.12
HERC3-214ENST00000601319 ATP6V1E1P36543 226 aa14.29□□□□□ -0.12
HERC3-214ENST00000601319 ZIK1Q3SY52 487 aaPredicted RBP14.29□□□□□ -0.12
HERC3-214ENST00000601319 KLF17Q5JT82 389 aaPredicted RBP14.29□□□□□ -0.12
HERC3-214ENST00000601319 CD276Q5ZPR3 534 aa14.29□□□□□ -0.12
HERC3-214ENST00000601319 TMEM42Q69YG0 159 aa14.29□□□□□ -0.12
HERC3-214ENST00000601319 PLEKHG7Q6ZR37 379 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms