RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 CEP78Q5JTW2 689 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 FAM209AQ5JX71 171 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 CLVS2Q5SYC1 327 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 WDR86Q86TI4 376 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 ZDHHC23Q8IYP9 409 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 FTMTQ8N4E7 242 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 NEU4Q8WWR8 484 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 TMEM203Q969S6 136 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 C10orf35Q96D05 121 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 ORAI1Q96D31 301 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 MBD6Q96DN6 1003 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 ITPKCQ96DU7 683 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 MEGF10Q96KG7 1140 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 OR14A2Q96R54 314 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 DIRC2Q96SL1 478 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 GSX2Q9BZM3 304 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 CHST5Q9GZS9 411 aa16.97■□□□□ 0.31
SHKBP1-222ENST00000600320 ANKRD61A6NGH8 418 aa16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 PIN1P1O15428 100 aa16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 OCM2P0CE71 109 aa16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 ZNF20P17024 532 aa16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 JUNBP17275 347 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 THBS2P35442 1172 aa16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 RBMXP38159 391 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 CD200P41217 278 aa16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 ATP5J2P56134 94 aa16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 UBE2V2Q15819 145 aa16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 Q499Y3 187 aa16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 PLCXD3Q63HM9 321 aa16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 OR8S1Q8NH09 359 aa16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 OR5P3Q8WZ94 311 aa16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 TRMT61AQ96FX7 289 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 OR2V2Q96R30 315 aa16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 CXXC4Q9H2H0 198 aa16.96■□□□□ 0.31
SHKBP1-222ENST00000600320 TRBV5-7A0A0A0MS05 114 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 IGKV1-9A0A0C4DH69 117 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 LOC100289279A0A1B0GTE1 492 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 ANXA2P2A6NMY6 339 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 TPD52L2O43399 206 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 TNFSF4P23510 183 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 EFNA4P52798 201 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 ACSM3Q53FZ2 586 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 PRAMEF6Q5VXH4 476 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 UNQ9370/PRO34162Q6UXP9 181 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 TGIF2LYQ8IUE0 185 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 MS4A15Q8N5U1 240 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 PARP16Q8N5Y8 322 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 TMEM106AQ96A25 262 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 RNF170Q96K19 258 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 DERL3Q96Q80 235 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 TAS2R4Q9NYW5 299 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 IL19Q9UHD0 177 aa16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 NOP16Q9Y3C1 178 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-222ENST00000600320 CHD3Q12873 2000 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 A0A1W2PPK0 400 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 ZNF879B4DU55 563 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 LYNX1G3V0Z9 82 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 CCRL2O00421 344 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 SC5DO75845 299 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 F12P00748 615 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 LYNX1P0DP58 116 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 ATF1P18846 271 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 FABP5Q01469 135 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 TESK1Q15569 626 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 TMEM91Q6ZNR0 172 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 UTS2BQ765I0 119 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 SPERTQ8NA61 448 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 OR13C9Q8NGT0 318 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 NPRL2Q8WTW4 380 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 PP6455Q8WZ26 134 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 YIPF5Q969M3 257 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 MICU1Q9BPX6 476 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 MRPS26Q9BYN8 205 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 ZCCHC4Q9H5U6 513 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 SAP30LQ9HAJ7 183 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 VCX3AQ9NNX9 186 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 ABCB9Q9NP78 766 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 DECR2Q9NUI1 292 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 NDUFB11Q9NX14 153 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 TREM2Q9NZC2 230 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 CACNG2Q9Y698 323 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 POLQO75417 2590 aa16.94■□□□□ 0.3
SHKBP1-222ENST00000600320 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 CDC14BO60729 498 aa16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 GATBO75879 557 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 PTBP3O95758 552 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 ERCC1P07992 297 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 COL8A2P25067 703 aa16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 GABRA5P31644 462 aa16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 TGFBR2P37173 567 aa16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 PMELP40967 661 aa16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 SRP9P49458 86 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 MPPED2Q15777 294 aa16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 CEACAM21Q3KPI0 293 aa16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 FAM27D1Q5T7N8 215 aa16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 OR51A2Q8NGJ7 313 aa16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 TRMT10AQ8TBZ6 339 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 RTL8AQ9BWD3 113 aa16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 EGLN1Q9GZT9 426 aa16.93■□□□□ 0.3
SHKBP1-222ENST00000600320 NOX4Q9NPH5 578 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms