RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 GTF2A1P52655 376 aaPredicted RBP12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 RIN1Q13671 783 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 ZNF181Q2M3W8 571 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 SPRNQ5BIV9 151 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 CLVS2Q5SYC1 327 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 PEG10Q86TG7 708 aaKnown RBP12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 RDH10Q8IZV5 341 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 C1orf87Q8N0U7 546 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 ZNF485Q8NCK3 441 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 OR11L1Q8NGX0 322 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 RPS4Y2Q8TD47 263 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 CCL17Q92583 94 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 HPS1Q92902 700 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 DVL3Q92997 716 aaPredicted RBP12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 ITPKCQ96DU7 683 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 SMIM19Q96E16 107 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 TIMD4Q96H15 378 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 TECTBQ96PL2 329 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 CCDC90BQ9GZT6 254 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 FN3KRPQ9HA64 309 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 GCM1Q9NP62 436 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 ERVK-18Q9QC07 812 aa12.77□□□□□ -0.37
GTF2F1-206ENST00000598607 DOCK11Q5JSL3 2073 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 TRIM64A6NGJ6 449 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 TRIM64BA6NI03 449 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 OR5B21A6NL26 309 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 LRRC30A6NM36 301 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 H3BSH0 61 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 PPIHO43447 177 aaKnown RBP12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 MRPS14O60783 128 aaKnown RBP12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 GATBO75879 557 aaKnown RBP12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 ZFPL1O95159 310 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 SERPINA3P01011 423 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 MT-ND2P03891 347 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 IRF2P14316 349 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 ZNF20P17024 532 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 NR4A2P43354 598 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 BDH1Q02338 343 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 ACSM1Q08AH1 577 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 IRF3Q14653 427 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 CEACAM21Q3KPI0 293 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 PLCXD3Q63HM9 321 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 XAF1Q6GPH4 301 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 MOB3CQ70IA8 216 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 MOGAT3Q86VF5 341 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 OR5A2Q8NGI9 324 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 OR13C3Q8NGS6 347 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 PP6455Q8WZ26 134 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 OR5P3Q8WZ94 311 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 RAB1CQ92928 201 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 RNF170Q96K19 258 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 PDCD1LG2Q9BQ51 273 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 REG4Q9BYZ8 158 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 BPESC1Q9GZL8 116 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 TMEM106BQ9NUM4 274 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 ITPR3Q14573 2671 aa12.76□□□□□ -0.37
GTF2F1-206ENST00000598607 LOC100289279A0A1B0GTE1 492 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 ANKRD61A6NGH8 418 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 A6NLC8 198 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 LALBAP00709 142 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 GRPP07492 148 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 GNG3P63215 75 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 SPHARQ15513 63 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 MED22Q15528 200 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 PRAMEF6Q5VXH4 476 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 TMEM42Q69YG0 159 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 DMKNQ6E0U4 476 aaPredicted RBP12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 KCTD8Q6ZWB6 473 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 Q8TCH9 128 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 TSEN15Q8WW01 171 aaKnown RBP12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 SGCDQ92629 289 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 CHST5Q9GZS9 411 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 TREM2Q9NZC2 230 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 DHDHQ9UQ10 334 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 ZNF281Q9Y2X9 895 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 CACNG2Q9Y698 323 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 MAST4O15021 2626 aa12.75□□□□□ -0.37
GTF2F1-206ENST00000598607 OTOGQ6ZRI0 2925 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 RNF223E7ERA6 249 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 H7C1Q1 480 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 PLPP2O43688 288 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 CD1AP06126 327 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 CD2P06729 351 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 CD99P14209 185 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 USF1P22415 310 aaPredicted RBP12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 LOXL1Q08397 574 aaPredicted RBP12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 CNN3Q15417 329 aaKnown RBP12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 CEP78Q5JTW2 689 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 SVOPQ8N4V2 548 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 OR1M1Q8NGA1 313 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 ZNF420Q8TAQ5 688 aaPredicted RBP12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 GPR148Q8TDV2 347 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 HPSE2Q8WWQ2 592 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 PPP1R3EQ9H7J1 279 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 GPR173Q9NS66 373 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 UFSP2Q9NUQ7 469 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 SLC7A11Q9UPY5 501 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 LRRC42Q9Y546 428 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 NPTNQ9Y639 398 aa12.74□□□□□ -0.37
GTF2F1-206ENST00000598607 IGHV3-64DA0A0J9YX35 117 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms