RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 P2RY10O00398 339 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 CASQ2O14958 399 aaPredicted RBP11.6□□□□□ -0.55
UPF1-205ENST00000598209 MTRF1O75570 445 aaKnown RBP11.6□□□□□ -0.55
UPF1-205ENST00000598209 FAM157CP0CG43 387 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 RPS2P15880 293 aaKnown RBP11.6□□□□□ -0.55
UPF1-205ENST00000598209 FAHP16930 419 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 ZFP36P26651 326 aaKnown RBP11.6□□□□□ -0.55
UPF1-205ENST00000598209 CD80P33681 288 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 THBS2P35442 1172 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 PSMB10P40306 273 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 ISL1P61371 349 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 CSNK2BP67870 215 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 KRTAP21-3Q3LHN1 58 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 CDONQ4KMG0 1287 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 ZBTB37Q5TC79 503 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 OGFRL1Q5TC84 451 aaPredicted RBP11.6□□□□□ -0.55
UPF1-205ENST00000598209 ZNF691Q5VV52 312 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 TTC23Q5W5X9 447 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 KRT74Q7RTS7 529 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 C11orf53Q8IXP5 236 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 ACBD7Q8N6N7 88 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 DEFB108BQ8NET1 73 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 HPSE2Q8WWQ2 592 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 RNF170Q96K19 258 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 HIST1H2AAQ96QV6 131 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 FGF23Q9GZV9 251 aaPredicted RBP11.6□□□□□ -0.55
UPF1-205ENST00000598209 METTL17Q9H7H0 456 aaPredicted RBP11.6□□□□□ -0.55
UPF1-205ENST00000598209 DCLRE1BQ9H816 532 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 MIOXQ9UGB7 285 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 PIGLQ9Y2B2 252 aa11.6□□□□□ -0.55
UPF1-205ENST00000598209 TMEM210A6NLX4 147 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 C3orf80F5H4A9 247 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 LGALS8O00214 317 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 WBP4O75554 376 aaKnown RBP11.59□□□□□ -0.55
UPF1-205ENST00000598209 CLIC3O95833 236 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 WNT2P09544 360 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 EGR1P18146 543 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 SRD5A1P18405 259 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 OR12D2P58182 307 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 ODF4Q2M2E3 257 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 ESCO2Q56NI9 601 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 WDR38Q5JTN6 314 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 CEP78Q5JTW2 689 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 SFRP4Q6FHJ7 346 aaPredicted RBP11.59□□□□□ -0.55
UPF1-205ENST00000598209 FAHD2BQ6P2I3 314 aaPredicted RBP11.59□□□□□ -0.55
UPF1-205ENST00000598209 DCDC5Q6ZRR9 648 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 KCTD8Q6ZWB6 473 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 MOB3CQ70IA8 216 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 DOK3Q7L591 496 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 KCTD20Q7Z5Y7 419 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 DHRSXQ8N5I4 330 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 GCSAMQ8N6F7 178 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 OR14K1Q8NGZ2 314 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 LRRC29Q8WV35 223 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 FAHD2AQ96GK7 314 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 TLNRD1Q9H1K6 362 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 RNPEPL1Q9HAU8 725 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 ENPP5Q9UJA9 477 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 MYRFQ9Y2G1 1151 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 LRCH1Q9Y2L9 728 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 RPL36Q9Y3U8 105 aaKnown RBP11.59□□□□□ -0.55
UPF1-205ENST00000598209 V9GYS6 101 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 JMJD1CQ15652 2540 aa11.59□□□□□ -0.55
UPF1-205ENST00000598209 TRAV38-1A0A0B4J264 116 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 A0A0G2JMP0 313 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 A0A0X1KG70 313 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 A0A1B0GVI7 797 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 OOEPA6NGQ2 149 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 A8MXK9 166 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 H3BSH0 61 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 CDIPTO14735 213 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 PHF1O43189 567 aaPredicted RBP11.58□□□□□ -0.56
UPF1-205ENST00000598209 FADS2O95864 444 aaKnown RBP11.58□□□□□ -0.56
UPF1-205ENST00000598209 LHBP01229 141 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 CCL1P22362 96 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 CPT2P23786 658 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 KIR3DL2P43630 455 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 GPM6AP51674 278 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 ADARB1P78563 741 aaKnown RBP11.58□□□□□ -0.56
UPF1-205ENST00000598209 RAB40BQ12829 278 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 GALEQ14376 348 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 KCNJ8Q15842 424 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 SMN1Q16637 294 aaKnown RBP11.58□□□□□ -0.56
UPF1-205ENST00000598209 CEACAM21Q3KPI0 293 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 DMRTC1Q5HYR2 192 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 DCAF12L2Q5VW00 463 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 PLCXD3Q63HM9 321 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 LYPD2Q6UXB3 125 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 WDR82Q6UXN9 313 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 Q6ZSR3 168 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 NLRC3Q7RTR2 1065 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 LHFPL3Q86UP9 236 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 PRSS35Q8N3Z0 413 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 OR4M2Q8NGB6 313 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 OR8B3Q8NGG8 313 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 CNIH3Q8TBE1 160 aa11.58□□□□□ -0.56
UPF1-205ENST00000598209 RPL3LQ92901 407 aaKnown RBP11.58□□□□□ -0.56
UPF1-205ENST00000598209 RNF166Q96A37 237 aaPredicted RBP11.58□□□□□ -0.56
UPF1-205ENST00000598209 NEIL1Q96FI4 390 aaPredicted RBP11.58□□□□□ -0.56
UPF1-205ENST00000598209 MRPL48Q96GC5 212 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms