RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ANKRD60Q9BZ19 345 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 PPP1R3EQ9H7J1 279 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 FN3KRPQ9HA64 309 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 PLEKHA1Q9HB21 404 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 PSORS1C1Q9UIG5 152 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 CAB39Q9Y376 341 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 NPTNQ9Y639 398 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 V9GYS6 101 aa16.59■□□□□ 0.25
SHKBP1-214ENST00000597396 CSPG4Q6UVK1 2322 aa16.58■□□□□ 0.25
SHKBP1-214ENST00000597396 LOC100289279A0A1B0GTE1 492 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 LOC107986453A0A1B0GWG9 222 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 LY6G6DO95868 133 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 CCL1P22362 96 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 CSNK2BP67870 215 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 ALKBH1Q13686 389 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 MPPED2Q15777 294 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 C6orf141Q5SZD1 244 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 TMEM244Q5VVB8 128 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 C1orf87Q8N0U7 546 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 CCDC54Q8NEL0 328 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 OR14K1Q8NGZ2 314 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 CLDND2Q8NHS1 167 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 HAVCR2Q8TDQ0 301 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 RNF166Q96A37 237 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 ITPKCQ96DU7 683 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 SCN3BQ9NY72 215 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 FRRS1LQ9P0K9 344 aa16.58■□□□□ 0.24
SHKBP1-214ENST00000597396 TMEM178BH3BS89 294 aa16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 PTBP3O95758 552 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 CYB5R3P00387 301 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 HEXAP06865 529 aa16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 ZNF12P17014 697 aa16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 RBMXP38159 391 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 CCR9P51686 369 aa16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 CDH15P55291 814 aa16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 NANOS3P60323 173 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 ZNF181Q2M3W8 571 aa16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 KCTD8Q6ZWB6 473 aa16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 MOB3CQ70IA8 216 aa16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 RNF170Q96K19 258 aa16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 RAB26Q9ULW5 256 aa16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 ABCA2Q9BZC7 2435 aa16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 MALRD1Q5VYJ5 2156 aa16.57■□□□□ 0.24
SHKBP1-214ENST00000597396 TLN2Q9Y4G6 2542 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 hCG_1807616A0A1W2PRN6 198 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 DHRS7CA6NNS2 312 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 SLC1A7O00341 560 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 WNT9BO14905 357 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 CCDC159P0C7I6 412 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 PMELP40967 661 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 GZMKP49863 264 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 CEP78Q5JTW2 689 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 CLVS2Q5SYC1 327 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 OR2G6Q5TZ20 316 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 PLCXD3Q63HM9 321 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 Q6ZSR3 168 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 RDH10Q8IZV5 341 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 ZNF676Q8N7Q3 588 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 Q8TCH9 128 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 OR5P3Q8WZ94 311 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 CNBD2Q96M20 576 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 GAL3ST1Q99999 423 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 C1orf123Q9NWV4 160 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 RNF7Q9UBF6 113 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 CLEC2DQ9UHP7 191 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 DOCK11Q5JSL3 2073 aa16.56■□□□□ 0.24
SHKBP1-214ENST00000597396 A6NIN4 97 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 TMEM210A6NLX4 147 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 NRASP01111 189 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 IGHV2-70P01814 119 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 IGHV4-31P0DP07 118 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 IL2RGP31785 369 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 BTG1P62324 171 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 KRT74Q7RTS7 529 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 WDR86Q86TI4 376 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 OR1M1Q8NGA1 313 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 HPSE2Q8WWQ2 592 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 COMMD4Q9H0A8 199 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 GPR173Q9NS66 373 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 UBAP1Q9NZ09 502 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 HHLA2Q9UM44 414 aa16.55■□□□□ 0.24
SHKBP1-214ENST00000597396 ZANQ9Y493 2812 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 OR4C45A6NMZ5 311 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 PTGES3LE9PB15 166 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 E9PI62 339 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 MYL12BO14950 172 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 ISG15P05161 165 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 TGM4P49221 684 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 ZNF154Q13106 437 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 CEACAM21Q3KPI0 293 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 CYB5R2Q6BCY4 276 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 ZNF826PQ6ZT77 177 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 BOLLQ8N9W6 283 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 OR52N1Q8NH53 320 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 MYDGFQ969H8 173 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 RAB39BQ96DA2 213 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 ZNF184Q99676 751 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 FKBP14Q9NWM8 211 aa16.54■□□□□ 0.24
SHKBP1-214ENST00000597396 TPRKBQ9Y3C4 175 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms