RNA–Protein interactions for RNA: ENST00000595974.5

TRIM28-206, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-206ENST00000595974 TEX36Q5VZQ5 186 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 LYPD2Q6UXB3 125 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 SSX6Q7RTT6 188 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 SEMA6DQ8NFY4 1073 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 OR10H4Q8NGA5 316 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 NANPQ8TBE9 248 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 OR51E1Q8TCB6 317 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 HPSE2Q8WWQ2 592 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 OR5P3Q8WZ94 311 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 PIGCQ92535 297 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 TBX5Q99593 518 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 MRI1Q9BV20 369 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 PPP1R3EQ9H7J1 279 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 CLN8Q9UBY8 286 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 SNX5Q9Y5X3 404 aa13.53□□□□□ -0.24
TRIM28-206ENST00000595974 A0A1W2PQL4 384 aaPredicted RBP13.52□□□□□ -0.25
TRIM28-206ENST00000595974 MAGEB4O15481 346 aaPredicted RBP13.52□□□□□ -0.25
TRIM28-206ENST00000595974 DHRS3O75911 302 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 APOL3O95236 402 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 FSHBP01225 129 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 EPHA1P21709 976 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 MTNR1AP48039 350 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 NPY4RP50391 375 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 HOXA4Q00056 320 aaPredicted RBP13.52□□□□□ -0.25
TRIM28-206ENST00000595974 RIPPLY1Q0D2K3 151 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 ZSCAN26Q16670 478 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 WDR25Q64LD2 544 aaPredicted RBP13.52□□□□□ -0.25
TRIM28-206ENST00000595974 SFRP4Q6FHJ7 346 aaPredicted RBP13.52□□□□□ -0.25
TRIM28-206ENST00000595974 BTNL3Q6UXE8 466 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 WDR82Q6UXN9 313 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 ZBTB49Q6ZSB9 765 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 THAP5Q7Z6K1 395 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 C11orf53Q8IXP5 236 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 ELMOD2Q8IZ81 293 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 YIPF7Q8N8F6 280 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 LRRC29Q8WV35 223 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 FAM71F1Q96KD3 344 aaPredicted RBP13.52□□□□□ -0.25
TRIM28-206ENST00000595974 HIST1H2AAQ96QV6 131 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 MBOAT4Q96T53 435 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 OR52A1Q9UKL2 312 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 GMPPBQ9Y5P6 360 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 AUP1Q9Y679 476 aa13.52□□□□□ -0.25
TRIM28-206ENST00000595974 A0A0A6YYJ9 748 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 IGHV2-70DA0A0C4DH43 119 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 METTL15A6NJ78 407 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 SNTNA6NMZ2 147 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 SRRM5B3KS81 715 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 ENTPD6O75354 484 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 SULT1C4O75897 302 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 MUC1P15941 1255 aaPredicted RBP13.51□□□□□ -0.25
TRIM28-206ENST00000595974 EGR1P18146 543 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 ADRA2CP18825 462 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 ACTC1P68032 377 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 ACTA1P68133 377 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 PAX2Q02962 417 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 OCLNQ16625 522 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 FAM76BQ5HYJ3 339 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 ZNF684Q5T5D7 378 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 ZNF841Q6ZN19 808 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 PLEKHG7Q6ZR37 379 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 KCTD8Q6ZWB6 473 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 FAM90A1Q86YD7 464 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 OR10Z1Q8NGY1 313 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 RAB40AQ8WXH6 277 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 UBE2FQ969M7 185 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 DACT3Q96B18 629 aaPredicted RBP13.51□□□□□ -0.25
TRIM28-206ENST00000595974 RNF170Q96K19 258 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 OCEL1Q9H607 264 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 ERVK-18Q9QC07 812 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 CTSZQ9UBR2 303 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 ENPP5Q9UJA9 477 aa13.51□□□□□ -0.25
TRIM28-206ENST00000595974 OR5B21A6NL26 309 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 DHRS7CA6NNS2 312 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 CDIPTO14735 213 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 TNFRSF13BO14836 293 aaPredicted RBP13.5□□□□□ -0.25
TRIM28-206ENST00000595974 ADAM20O43506 726 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 MPZL2O60487 215 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 PPIAL4GP0DN37 164 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 FAHP16930 419 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 GNG3P63215 75 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 PAX8Q06710 450 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 MICBQ29980 383 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 CEACAM21Q3KPI0 293 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 KRTAP24-1Q3LI83 254 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 ARMCX4Q5H9R4 360 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 FAM220AQ7Z4H9 259 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 SPATA3Q8NHX4 192 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 ZNF418Q8TF45 676 aaPredicted RBP13.5□□□□□ -0.25
TRIM28-206ENST00000595974 PPP1R14AQ96A00 147 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 C12orf43Q96C57 262 aaKnown RBP13.5□□□□□ -0.25
TRIM28-206ENST00000595974 TECTBQ96PL2 329 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 SLC29A1Q99808 456 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 FGF23Q9GZV9 251 aaPredicted RBP13.5□□□□□ -0.25
TRIM28-206ENST00000595974 KAAG1Q9UBP8 84 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 PIGLQ9Y2B2 252 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 V9GYS6 101 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 STAB1Q9NY15 2570 aa13.5□□□□□ -0.25
TRIM28-206ENST00000595974 ENSAO43768 121 aaKnown RBP13.49□□□□□ -0.25
TRIM28-206ENST00000595974 RPP14O95059 124 aaKnown RBP13.49□□□□□ -0.25
TRIM28-206ENST00000595974 BAG2O95816 211 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms