RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ONECUT1Q9UBC0 465 aa11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 CAB39Q9Y376 341 aaPredicted RBP11.23□□□□□ -0.61
SHKBP1-208ENST00000595726 FAM183AA6NL82 134 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 F5H5K5 113 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 NPFFO15130 113 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 FBXO24O75426 580 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 TIPRLO75663 272 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 OSMP13725 252 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 ANXA8P13928 327 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 CD33P20138 364 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 PRKACGP22612 351 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 FMO3P31513 532 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 ELF3P78545 371 aaPredicted RBP11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 ECH1Q13011 328 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 PCK2Q16822 640 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 LINC01590Q5TEZ4 76 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 ZNF511Q8NB15 262 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 WFDC9Q8NEX5 89 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 OR4F17Q8NGA8 305 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 OR5L1Q8NGL2 311 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 OR4C13Q8NGP0 309 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 OR6K6Q8NGW6 343 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 OR11L1Q8NGX0 322 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 OR5R1Q8NH85 324 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 OR4F4Q96R69 305 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 MED20Q9H944 212 aa11.22□□□□□ -0.61
SHKBP1-208ENST00000595726 A0A1B0GVI7 797 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 A0A1B0GW55 424 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 MEIOCA2RUB1 952 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 MEGF11A6BM72 1044 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 M0R135 149 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 LGALS8O00214 317 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 PAHP00439 452 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 SPARCP09486 303 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 DUX4L2P0CJ85 424 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 DUX4L3P0CJ86 424 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 DUX4L4P0CJ87 422 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 DUX4L5P0CJ88 424 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 DUX4L6P0CJ89 424 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 DUX4L7P0CJ90 424 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 PAX6P26367 422 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 POU1F1P28069 291 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 OTX1P32242 354 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 SAA4P35542 130 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 GATA4P43694 442 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 ENTPD1P49961 510 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 HABP2Q14520 560 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 OR8B8Q15620 311 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 C11orf88Q6PI97 169 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 DUX4L9Q6RFH8 374 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 DCXRQ7Z4W1 244 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 SPERTQ8NA61 448 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 Q8TCH9 128 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 C17orf50Q8WW18 174 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 ST8SIA4Q92187 359 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 RORBQ92753 470 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 UTP4Q969X6 686 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 ZNF799Q96GE5 643 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 B9D2Q9BPU9 175 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 OCSTAMPQ9BR26 566 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 ZNF556Q9HAH1 456 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 DUX4Q9UBX2 424 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 RPUSD1Q9UJJ7 312 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 KPTNQ9Y664 436 aa11.21□□□□□ -0.61
SHKBP1-208ENST00000595726 IQCF6A8MYZ5 107 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 ANOS1P23352 680 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 EEF1B2P24534 225 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 BLVRAP53004 296 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 RAD23AP54725 363 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 TPTEP56180 551 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 CDK5Q00535 292 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 GINS1Q14691 196 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 TEX30Q5JUR7 227 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 C1orf146Q5VVC0 180 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 NAA40Q86UY6 237 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 NDUFA11Q86Y39 141 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 Q8N7P7 452 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 NPRL2Q8WTW4 380 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 SLAMF6Q96DU3 332 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 NRBF2Q96F24 287 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 SSX3Q99909 188 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 RNF7Q9UBF6 113 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 PCDHGB5Q9Y5G0 923 aa11.2□□□□□ -0.62
SHKBP1-208ENST00000595726 IGHV3OR15-7A0A075B7D8 119 aa11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 A0A1B0GWJ7 208 aa11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 A0A1W2PRX2 142 aa11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 ZNF878C9JN71 531 aa11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 ZNF593O00488 134 aaPredicted RBP11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 GLCEO94923 617 aa11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 LCATP04180 440 aa11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 PAICSP22234 425 aaKnown RBP11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 HOXD3P31249 432 aaPredicted RBP11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 GK2Q14410 553 aaPredicted RBP11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 KCNJ8Q15842 424 aa11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 ATP6AP1Q15904 470 aa11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 SNAI3Q3KNW1 292 aa11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 FAHD1Q6P587 224 aa11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 ERI1Q8IV48 349 aaKnown RBP11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 OR6N2Q8NGY6 317 aa11.19□□□□□ -0.62
SHKBP1-208ENST00000595726 OR5K1Q8NHB7 308 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms