RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 APOA1P02647 267 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 ISG15P05161 165 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 EIF4EP06730 217 aaKnown RBP10.99□□□□□ -0.65
SCAF1-202ENST00000595242 FSTP19883 344 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 RAC3P60763 192 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 SCN1BQ07699 218 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 ABLIM2Q6H8Q1 611 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 BAIAP2L2Q6UXY1 529 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 CREB3L2Q70SY1 520 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 DCXRQ7Z4W1 244 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 LRRTM1Q86UE6 522 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 GLCCI1Q86VQ1 547 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 ZNF100Q8IYN0 542 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 TMEM123Q8N131 208 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 OR8H2Q8N162 312 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 ZNF676Q8N7Q3 588 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 SLITRK2Q9H156 845 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 B3GAT2Q9NPZ5 323 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 POLE4Q9NR33 117 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 C14orf119Q9NWQ9 140 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 KMT2CQ8NEZ4 4911 aaKnown RBP10.99□□□□□ -0.65
SCAF1-202ENST00000595242 IFITM5A6NNB3 132 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 B4DSR2 109 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 ATP6V1G2-DDX39BF2Z307 99 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 IGHV3-9P01782 118 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 CALCBP10092 127 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 CD37P11049 281 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 SLC2A2P11168 524 aaPredicted RBP10.98□□□□□ -0.65
SCAF1-202ENST00000595242 ACHEP22303 614 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 AZGP1P25311 298 aaKnown RBP10.98□□□□□ -0.65
SCAF1-202ENST00000595242 MMP16P51512 607 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 MFGE8Q08431 387 aaPredicted RBP10.98□□□□□ -0.65
SCAF1-202ENST00000595242 FOXL1Q12952 345 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 CAMK2DQ13557 499 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 OR7E24Q6IFN5 339 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 GDPD3Q7L5L3 318 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 ZNF554Q86TJ5 538 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 GPAT4Q86UL3 456 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 UBE2J2Q8N2K1 259 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 SAMD12Q8N8I0 201 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 OR9K2Q8NGE7 335 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 CHAC2Q8WUX2 184 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 OR2M2Q96R28 347 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 NIPAL2Q9H841 368 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 G6PC2Q9NQR9 355 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 EXTL2Q9UBQ6 330 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 RCE1Q9Y256 329 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 SPEF1Q9Y4P9 236 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 V9GY05 133 aa10.98□□□□□ -0.65
SCAF1-202ENST00000595242 A0A1W2PPK0 400 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 ZNF726A6NNF4 738 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 FAM25AB3EWG3 89 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 FAM25CB3EWG5 89 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 FAM25GB3EWG6 89 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 DAOP14920 347 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 ADRA2CP18825 462 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 EPHA1P21709 976 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 SERPINF1P36955 418 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 TALDO1P37837 337 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 CLDN17P56750 224 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 LSM6P62312 80 aaKnown RBP10.97□□□□□ -0.65
SCAF1-202ENST00000595242 IL18Q14116 193 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 P2RY14Q15391 338 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 PYDC2Q56P42 97 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 UBE2NLQ5JXB2 153 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 HACD4Q5VWC8 232 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 FBXW9Q5XUX1 488 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 PYHIN1Q6K0P9 492 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 LRFN4Q6PJG9 635 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 OR4M1Q8NGD0 313 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 OR10S1Q8NGN2 331 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 OR5H6Q8NGV6 325 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 OR10AC1Q8NH08 325 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 TMEM186Q96B77 213 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 SLAMF6Q96DU3 332 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 RAB1BQ9H0U4 201 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 C1orf198Q9H425 327 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 MOB1AQ9H8S9 216 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 TCF7L1Q9HCS4 588 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 HIF1ANQ9NWT6 349 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 FAM206AQ9NX38 181 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 ETAA1Q9NY74 926 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 GLTPQ9NZD2 209 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 FOXJ3Q9UPW0 622 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 AK6Q9Y3D8 172 aaKnown RBP10.97□□□□□ -0.65
SCAF1-202ENST00000595242 ETV7Q9Y603 341 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 LHFPL6Q9Y693 200 aa10.97□□□□□ -0.65
SCAF1-202ENST00000595242 A0A1W2PPL8 197 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 ZNF716A6NP11 495 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 ZNF724A8MTY0 619 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 ZNF878C9JN71 531 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 CTDSPLO15194 276 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 SLC43A1O75387 559 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 TPPPO94811 219 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 UBL3O95164 117 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 PAHP00439 452 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 QDPRP09417 244 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 H2BFMP0C1H6 154 aa10.96□□□□□ -0.65
SCAF1-202ENST00000595242 UBCP0CG48 685 aaKnown RBP10.96□□□□□ -0.65
SCAF1-202ENST00000595242 SPNP16150 400 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms