RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 OR5AC2Q9NZP5 309 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 PISDQ9UG56 409 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 WIF1Q9Y5W5 379 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 IGLV3-12A0A075B6K2 115 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 PRSS44E7EML9 344 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 E9PLN8 166 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 ZNF585AQ6P3V2 769 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 WDR74Q6RFH5 385 aaPredicted RBP14.54□□□□□ -0.08
LIG1-206ENST00000594067 ZNF574Q6ZN55 896 aaPredicted RBP14.54□□□□□ -0.08
LIG1-206ENST00000594067 NPRL2Q8WTW4 380 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 MAFIPQ8WZ33 124 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 CPNE2Q96FN4 548 aaPredicted RBP14.54□□□□□ -0.08
LIG1-206ENST00000594067 OR6C1Q96RD1 312 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 ST6GALNAC5Q9BVH7 336 aa14.54□□□□□ -0.08
LIG1-206ENST00000594067 PNRC2Q9NPJ4 139 aaKnown RBP14.54□□□□□ -0.08
LIG1-206ENST00000594067 MED12Q93074 2177 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 IGKV1-9A0A0C4DH69 117 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 SDCBPO00560 298 aaPredicted RBP14.53□□□□□ -0.08
LIG1-206ENST00000594067 LYL1P12980 280 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 SLC25A53Q5H9E4 307 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 VAX1Q5SQQ9 334 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 RNF138Q8WVD3 245 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 ANAPC10Q9UM13 185 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 MTCH2Q9Y6C9 303 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 HTR3BO95264 441 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 FARS2O95363 451 aaKnown RBP14.53□□□□□ -0.08
LIG1-206ENST00000594067 SFT2D2O95562 160 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 ZNF43P17038 809 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 MSX1P28360 303 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 CAV2P51636 162 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 PRSS54Q6PEW0 395 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 RABEPKQ7Z6M1 372 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 TMEM200AQ86VY9 491 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 OR5H2Q8NGV7 314 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 ADAMTS17Q8TE56 1095 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 LIN37Q96GY3 246 aaPredicted RBP14.53□□□□□ -0.08
LIG1-206ENST00000594067 SMIM8Q96KF7 97 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 CHRDQ9H2X0 955 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 FLVCR1Q9Y5Y0 555 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 EXPH5Q8NEV8 1989 aa14.53□□□□□ -0.08
LIG1-206ENST00000594067 AMY2BP19961 511 aa14.52□□□□□ -0.08
LIG1-206ENST00000594067 DHPSP49366 369 aaPredicted RBP14.52□□□□□ -0.08
LIG1-206ENST00000594067 TMEM176BQ3YBM2 270 aaPredicted RBP14.52□□□□□ -0.08
LIG1-206ENST00000594067 ARRDC1Q8N5I2 433 aa14.52□□□□□ -0.08
LIG1-206ENST00000594067 OR5L2Q8NGL0 311 aa14.52□□□□□ -0.08
LIG1-206ENST00000594067 OR13G1Q8NGZ3 307 aa14.52□□□□□ -0.08
LIG1-206ENST00000594067 ZNF576Q9H609 170 aa14.52□□□□□ -0.08
LIG1-206ENST00000594067 OR2S2Q9NQN1 319 aa14.52□□□□□ -0.08
LIG1-206ENST00000594067 MYOTQ9UBF9 498 aa14.52□□□□□ -0.08
LIG1-206ENST00000594067 ZNF726A6NNF4 738 aa14.52□□□□□ -0.09
LIG1-206ENST00000594067 COLCA2A8K830 154 aa14.52□□□□□ -0.09
LIG1-206ENST00000594067 MFNGO00587 321 aa14.52□□□□□ -0.09
LIG1-206ENST00000594067 SCRG1O75711 98 aa14.52□□□□□ -0.09
LIG1-206ENST00000594067 IFNA4P05014 189 aa14.52□□□□□ -0.09
LIG1-206ENST00000594067 ANKRD55Q3KP44 614 aa14.52□□□□□ -0.09
LIG1-206ENST00000594067 C1QL2Q7Z5L3 287 aa14.52□□□□□ -0.09
LIG1-206ENST00000594067 SKA3Q8IX90 412 aa14.52□□□□□ -0.09
LIG1-206ENST00000594067 OR2M3Q8NG83 312 aa14.52□□□□□ -0.09
LIG1-206ENST00000594067 OR56B1Q8NGI3 324 aa14.52□□□□□ -0.09
LIG1-206ENST00000594067 OR51T1Q8NGJ9 327 aa14.52□□□□□ -0.09
LIG1-206ENST00000594067 OR6X1Q8NH79 312 aa14.52□□□□□ -0.09
LIG1-206ENST00000594067 SAT2Q96F10 170 aaPredicted RBP14.52□□□□□ -0.09
LIG1-206ENST00000594067 AQP10Q96PS8 301 aa14.52□□□□□ -0.09
LIG1-206ENST00000594067 RTBDNQ9BSG5 229 aaPredicted RBP14.52□□□□□ -0.09
LIG1-206ENST00000594067 RAB18Q9NP72 206 aa14.52□□□□□ -0.09
LIG1-206ENST00000594067 CEACAM18A8MTB9 384 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 MBTPS2O43462 519 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 IGFBP4P22692 258 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 SUPT4H1P63272 117 aaKnown RBP14.51□□□□□ -0.09
LIG1-206ENST00000594067 DOK3Q7L591 496 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 CPEB2Q7Z5Q1 589 aaKnown RBP14.51□□□□□ -0.09
LIG1-206ENST00000594067 URM1Q9BTM9 101 aaKnown RBP14.51□□□□□ -0.09
LIG1-206ENST00000594067 SLC5A7Q9GZV3 580 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 RALGAPA1Q6GYQ0 2036 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 RNASEK-C17orf49H0YIS7 233 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 EIF3GO75821 320 aaKnown RBP eCLIP14.51□□□□□ -0.09
LIG1-206ENST00000594067 ZFAND5O76080 213 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 ACTBL2Q562R1 376 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 PRAMEF20Q5VT98 475 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 OR14K1Q8NGZ2 314 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 OR10C1Q96KK4 312 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 OXGR1Q96P68 337 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 OCSTAMPQ9BR26 566 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 OR10A2Q9H208 303 aa14.51□□□□□ -0.09
LIG1-206ENST00000594067 BCAT2O15382 392 aaPredicted RBP14.5□□□□□ -0.09
LIG1-206ENST00000594067 ACAA1P09110 424 aaPredicted RBP14.5□□□□□ -0.09
LIG1-206ENST00000594067 GLRA1P23415 457 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 FPR2P25090 351 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 OR3A2P47893 321 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 CSNK2A1P68400 391 aaPredicted RBP14.5□□□□□ -0.09
LIG1-206ENST00000594067 PEA15Q15121 130 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 LCN10Q6JVE6 187 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 ADPRHL1Q8NDY3 354 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 CSNK2A3Q8NEV1 391 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 OR51F2Q8NH61 342 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 PGAM5Q96HS1 289 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 PCED1AQ9H1Q7 454 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 METTL8Q9H825 291 aaKnown RBP14.5□□□□□ -0.09
LIG1-206ENST00000594067 CCL1P22362 96 aa14.5□□□□□ -0.09
LIG1-206ENST00000594067 PTGFRP43088 359 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms