RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 C6orf183Q5T699 404 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 ATP1A1-AS1Q5TC04 95 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 SLC16A14Q7RTX9 510 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 TMED4Q7Z7H5 227 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 CD163Q86VB7 1156 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 NPRL2Q8WTW4 380 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 MRGPRFQ96AM1 343 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 WDR89Q96FK6 387 aaPredicted RBP17.19■□□□□ 0.34
CLIP3-206ENST00000593074 ANKRD34BA5PLL1 514 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 CDK2AP1O14519 115 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 GOSR2O14653 212 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 RGS11O94810 467 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 CSN2P05814 226 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 SSTR2P30874 369 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 MAGEA5P43359 124 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 PCBD1P61457 104 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 CXADRP78310 365 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 PSG4Q00888 419 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 NRN1LQ496H8 165 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 DMRTC1Q5HYR2 192 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 GALNTL5Q7Z4T8 443 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 C1QL2Q7Z5L3 287 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 ZNF680Q8NEM1 530 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 SEMA6DQ8NFY4 1073 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 OR5D18Q8NGL1 313 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.19■□□□□ 0.34
CLIP3-206ENST00000593074 VSIG4Q9Y279 399 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 TIMM10BQ9Y5J6 103 aa17.19■□□□□ 0.34
CLIP3-206ENST00000593074 ARGFXA6NJG6 315 aa17.18■□□□□ 0.34
CLIP3-206ENST00000593074 FOXI3A8MTJ6 420 aaPredicted RBP17.18■□□□□ 0.34
CLIP3-206ENST00000593074 KLRC4-KLRK1H3BQV0 150 aa17.18■□□□□ 0.34
CLIP3-206ENST00000593074 SNAPC5O75971 98 aa17.18■□□□□ 0.34
CLIP3-206ENST00000593074 ZNF35P13682 527 aa17.18■□□□□ 0.34
CLIP3-206ENST00000593074 ZNF708P17019 499 aa17.18■□□□□ 0.34
CLIP3-206ENST00000593074 ACKR3P25106 362 aa17.18■□□□□ 0.34
CLIP3-206ENST00000593074 IKZF1Q13422 519 aa17.18■□□□□ 0.34
CLIP3-206ENST00000593074 TMEM251Q8N6I4 163 aa17.18■□□□□ 0.34
CLIP3-206ENST00000593074 ZDHHC22Q8N966 263 aa17.18■□□□□ 0.34
CLIP3-206ENST00000593074 AKR7LQ8NHP1 331 aa17.18■□□□□ 0.34
CLIP3-206ENST00000593074 OR2H1Q9GZK4 316 aa17.18■□□□□ 0.34
CLIP3-206ENST00000593074 WNT5BQ9H1J7 359 aa17.18■□□□□ 0.34
CLIP3-206ENST00000593074 OTOGLQ3ZCN5 2332 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 F5H5P2 479 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 NME2P1O60361 137 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 SIX6O95475 246 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 MPC2O95563 127 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 FCGR2AP12318 317 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 NME2P22392 152 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 HTR5AP47898 357 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 SRYQ05066 204 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 RSPO4Q2I0M5 234 aaPredicted RBP17.17■□□□□ 0.34
CLIP3-206ENST00000593074 DCAF12L2Q5VW00 463 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 MDS2Q8NDY4 140 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 OR2AE1Q8NHA4 323 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 REEP6Q96HR9 211 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 ARHGAP5-AS1Q96IT6 56 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 ZNF318Q5VUA4 2279 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 RAD51DO75771 328 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 PATE4P0C8F1 98 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 RRADP55042 308 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 TCF15Q12870 199 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 DHRS2Q13268 280 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.17■□□□□ 0.34
CLIP3-206ENST00000593074 C12orf45Q8N5I9 185 aaPredicted RBP17.17■□□□□ 0.34
CLIP3-206ENST00000593074 FGFBP3Q8TAT2 258 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 SPSB1Q96BD6 273 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 TM2D1Q9BX74 207 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 LINC00470Q9BZP3 86 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 SLC6A15Q9H2J7 730 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 ZNF391Q9UJN7 358 aa17.17■□□□□ 0.34
CLIP3-206ENST00000593074 NOSIPQ9Y314 301 aaKnown RBP17.17■□□□□ 0.34
CLIP3-206ENST00000593074 CD46P15529 392 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 MGMTP16455 207 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 MEOX1P50221 254 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 GRK1Q15835 563 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 SLC25A42Q86VD7 318 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 SKA3Q8IX90 412 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 PIGTQ969N2 578 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 OCSTAMPQ9BR26 566 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 CLEC4MQ9H2X3 399 aaPredicted RBP17.16■□□□□ 0.34
CLIP3-206ENST00000593074 B3GNT2Q9NY97 397 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 SLC22A5O76082 557 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 MMP7P09237 267 aaPredicted RBP17.16■□□□□ 0.34
CLIP3-206ENST00000593074 CXCL2P19875 107 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 ACTBL2Q562R1 376 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 TSPO2Q5TGU0 170 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 C17orf107Q6ZR85 190 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 STEAP2Q8NFT2 490 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 OR51T1Q8NGJ9 327 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 OR4K15Q8NH41 348 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 ELMOD3Q96FG2 381 aa17.16■□□□□ 0.34
CLIP3-206ENST00000593074 OR2AT4A6NND4 320 aa17.15■□□□□ 0.34
CLIP3-206ENST00000593074 MRPL33O75394 65 aaKnown RBP17.15■□□□□ 0.34
CLIP3-206ENST00000593074 LCATP04180 440 aa17.15■□□□□ 0.34
CLIP3-206ENST00000593074 C4BPBP20851 252 aa17.15■□□□□ 0.34
CLIP3-206ENST00000593074 NFYAP23511 347 aaPredicted RBP17.15■□□□□ 0.34
CLIP3-206ENST00000593074 PPIAP62937 165 aaKnown RBP17.15■□□□□ 0.34
CLIP3-206ENST00000593074 RIPPLY1Q0D2K3 151 aa17.15■□□□□ 0.34
CLIP3-206ENST00000593074 GK2Q14410 553 aaPredicted RBP17.15■□□□□ 0.34
CLIP3-206ENST00000593074 STK11Q15831 433 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms