RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 PKP2Q99959 881 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 RTL8AQ9BWD3 113 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 MROQ9BYG7 248 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 TLNRD1Q9H1K6 362 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 SEMA6AQ9H2E6 1030 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 ZNF391Q9UJN7 358 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 IKZF2Q9UKS7 526 aa11.52□□□□□ -0.57
APOC1-208ENST00000592535 A0A0U1RQV5 110 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 A0A1B0GW55 424 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 TMEM89A2RUT3 159 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 DNAJC9-AS1A6NH13 148 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 DVL1O14640 695 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 MAGEB4O15481 346 aaPredicted RBP11.51□□□□□ -0.57
APOC1-208ENST00000592535 CIB2O75838 187 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 DUX4L2P0CJ85 424 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 DUX4L3P0CJ86 424 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 DUX4L4P0CJ87 422 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 DUX4L5P0CJ88 424 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 DUX4L6P0CJ89 424 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 DUX4L7P0CJ90 424 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 RIDAP52758 137 aaKnown RBP11.51□□□□□ -0.57
APOC1-208ENST00000592535 MFGE8Q08431 387 aaPredicted RBP11.51□□□□□ -0.57
APOC1-208ENST00000592535 CD276Q5ZPR3 534 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 DUX4L9Q6RFH8 374 aaPredicted RBP11.51□□□□□ -0.57
APOC1-208ENST00000592535 SLC35F2Q8IXU6 374 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 ZDHHC23Q8IYP9 409 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 ZNF679Q8IYX0 411 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 FGFRL1Q8N441 504 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 FAM81AQ8TBF8 368 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 HPSE2Q8WWQ2 592 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 ASB17Q8WXJ9 295 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 RPL3LQ92901 407 aaKnown RBP11.51□□□□□ -0.57
APOC1-208ENST00000592535 PPP1R14AQ96A00 147 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 RNF170Q96K19 258 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 C1orf147Q96MC9 270 aaPredicted RBP11.51□□□□□ -0.57
APOC1-208ENST00000592535 PBOV1Q9GZY1 135 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 ADGRL4Q9HBW9 690 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 ABCB9Q9NP78 766 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 H2AFY2Q9P0M6 372 aaPredicted RBP11.51□□□□□ -0.57
APOC1-208ENST00000592535 KAAG1Q9UBP8 84 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 DUX4Q9UBX2 424 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 TMEM14AQ9Y6G1 99 aa11.51□□□□□ -0.57
APOC1-208ENST00000592535 ACOD1A6NK06 481 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 SLC22A31A6NKX4 558 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 TMEM210A6NLX4 147 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 SRRM5B3KS81 715 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 TMPRSS2O15393 492 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 ZNF254O75437 659 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 IGLV3-1P01715 115 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 MUC1P15941 1255 aaPredicted RBP11.5□□□□□ -0.57
APOC1-208ENST00000592535 DCTDP32321 178 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 POLR2IP36954 125 aaKnown RBP11.5□□□□□ -0.57
APOC1-208ENST00000592535 CFHR2P36980 270 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 MAP2K3P46734 347 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 COMPP49747 757 aaPredicted RBP11.5□□□□□ -0.57
APOC1-208ENST00000592535 GMFBP60983 142 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 CXCR4P61073 352 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 BAMBIQ13145 260 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 MICBQ29980 383 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 ZNF829Q3KNS6 432 aaPredicted RBP11.5□□□□□ -0.57
APOC1-208ENST00000592535 WDR38Q5JTN6 314 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 ZNF322Q6U7Q0 402 aaPredicted RBP11.5□□□□□ -0.57
APOC1-208ENST00000592535 BRD3OSQ6XYD6 125 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 C9orf139Q6ZV77 190 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 KCTD8Q6ZWB6 473 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 COMMD2Q86X83 199 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 SCCPDHQ8NBX0 429 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 OR51E1Q8TCB6 317 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 CENPNQ96H22 339 aaPredicted RBP11.5□□□□□ -0.57
APOC1-208ENST00000592535 FAM71F1Q96KD3 344 aaPredicted RBP11.5□□□□□ -0.57
APOC1-208ENST00000592535 CCL13Q99616 98 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 APOL4Q9BPW4 351 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 PCGF1Q9BSM1 259 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 GPR84Q9NQS5 396 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 ENOPH1Q9UHY7 261 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 OAZ3Q9UMX2 235 aa11.5□□□□□ -0.57
APOC1-208ENST00000592535 ZNF816-ZNF321PA0A0X1KG74 233 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 MDFIC2A0A1B0GVS7 189 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 SAC3D1A6NKF1 404 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 ZNF879B4DU55 563 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 ANKRD65E5RJM6 399 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 ZNF670-ZNF695F2Z2N8 137 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 SRSF10O75494 262 aaKnown RBP11.49□□□□□ -0.57
APOC1-208ENST00000592535 TTRP02766 147 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 SFTPBP07988 381 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 AMY2BP19961 511 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 PRTN3P24158 256 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 CFPP27918 469 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 MTNR1AP48039 350 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 FAM76BQ5HYJ3 339 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 DMRTC1Q5HYR2 192 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 CEP78Q5JTW2 689 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 PLEKHG7Q6ZR37 379 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 BTN2A1Q7KYR7 527 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 KRT74Q7RTS7 529 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 GID4Q8IVV7 300 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 FAM216BQ8N7L0 139 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 OR5T2Q8NGG2 359 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 OR10Z1Q8NGY1 313 aa11.49□□□□□ -0.57
APOC1-208ENST00000592535 PYDC1Q8WXC3 89 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms