RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 YTHDF1Q9BYJ9 559 aaKnown RBP5□□□□□ -1.61
VPS25-204ENST00000589577 KRTAP3-3Q9BYR6 98 aa5□□□□□ -1.61
VPS25-204ENST00000589577 KRTAP3-2Q9BYR7 98 aa5□□□□□ -1.61
VPS25-204ENST00000589577 EGLN1Q9GZT9 426 aa5□□□□□ -1.61
VPS25-204ENST00000589577 NUAK2Q9H093 628 aa5□□□□□ -1.61
VPS25-204ENST00000589577 PPA2Q9H2U2 334 aa5□□□□□ -1.61
VPS25-204ENST00000589577 DPAGT1Q9H3H5 408 aa5□□□□□ -1.61
VPS25-204ENST00000589577 SIAEQ9HAT2 523 aa5□□□□□ -1.61
VPS25-204ENST00000589577 MSL2Q9HCI7 577 aa5□□□□□ -1.61
VPS25-204ENST00000589577 DNAJC27Q9NZQ0 273 aa5□□□□□ -1.61
VPS25-204ENST00000589577 LAMP5Q9UJQ1 280 aa5□□□□□ -1.61
VPS25-204ENST00000589577 SNX5Q9Y5X3 404 aa5□□□□□ -1.61
VPS25-204ENST00000589577 HECTD4Q9Y4D8 3996 aa5□□□□□ -1.61
VPS25-204ENST00000589577 IQCMA0A1B0GVH7 501 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 OR6C68A6NDL8 312 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 ZNF879B4DU55 563 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 ZNF670-ZNF695F2Z2N8 137 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 TMEM178BH3BS89 294 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 M0R129 80 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 P2RY10O00398 339 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 MYL12BO14950 172 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 DENRO43583 198 aaKnown RBP4.99□□□□□ -1.61
VPS25-204ENST00000589577 FBXO24O75426 580 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 UBL3O95164 117 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 ZNF205O95201 554 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 TNFAIP8O95379 198 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 SLC2A10O95528 541 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 CLIC3O95833 236 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 APOC1P02654 83 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 GYPBP06028 91 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 SPARCP09486 303 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 CCDC159P0C7I6 412 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 VSIG10L2P0DP72 767 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 CTLA4P16410 223 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 DCKP27707 260 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 PYCR1P32322 319 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 WNT5AP41221 380 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 KIR2DS4P43632 304 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 ENTPD1P49961 510 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 CXCR4P61073 352 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 LSM6P62312 80 aaKnown RBP4.99□□□□□ -1.61
VPS25-204ENST00000589577 ACTA2P62736 377 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 ACTG2P63267 376 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 TNFAIP6P98066 277 aaPredicted RBP4.99□□□□□ -1.61
VPS25-204ENST00000589577 EMX1Q04741 257 aaPredicted RBP4.99□□□□□ -1.61
VPS25-204ENST00000589577 FMODQ06828 376 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 RAB40BQ12829 278 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 AQP6Q13520 282 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 FHL1Q13642 323 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 RBM48Q5RL73 367 aaKnown RBP4.99□□□□□ -1.61
VPS25-204ENST00000589577 SLC25A30Q5SVS4 291 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 ZFAND6Q6FIF0 208 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 SLC18B1Q6NT16 456 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 KCTD18Q6PI47 426 aaPredicted RBP4.99□□□□□ -1.61
VPS25-204ENST00000589577 C11orf88Q6PI97 169 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 ARL9Q6T311 187 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 NHLRC1Q6VVB1 395 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 ZNF841Q6ZN19 808 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 ZBTB46Q86UZ6 589 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.99□□□□□ -1.61
VPS25-204ENST00000589577 ENTHD1Q8IYW4 607 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 SVOPQ8N4V2 548 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 ZNF454Q8N9F8 522 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 GJC3Q8NFK1 279 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 BPIFB6Q8NFQ5 453 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 OR51L1Q8NGJ5 315 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 OR51G2Q8NGK0 314 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 OR1J1Q8NGS3 322 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 CNIH3Q8TBE1 160 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 HAVCR2Q8TDQ0 301 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 ASB17Q8WXJ9 295 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 RNFT2Q96EX2 444 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 ZNF582Q96NG8 517 aaPredicted RBP4.99□□□□□ -1.61
VPS25-204ENST00000589577 WDFY2Q96P53 400 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 TMEM246Q9BRR3 403 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 MRPL13Q9BYD1 178 aaKnown RBP4.99□□□□□ -1.61
VPS25-204ENST00000589577 BCL2L14Q9BZR8 327 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 YIPF3Q9GZM5 350 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 CCDC90BQ9GZT6 254 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 SIRPDQ9H106 197 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 C1orf198Q9H425 327 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 SP140LQ9H930 580 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 MED20Q9H944 212 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 WDR76Q9H967 626 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 INPP5EQ9NRR6 644 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 TMEM38BQ9NVV0 291 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 CNOT2Q9NZN8 540 aaKnown RBP4.99□□□□□ -1.61
VPS25-204ENST00000589577 B9D1Q9UPM9 204 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 MYRFQ9Y2G1 1151 aa4.99□□□□□ -1.61
VPS25-204ENST00000589577 COA3Q9Y2R0 106 aaPredicted RBP4.99□□□□□ -1.61
VPS25-204ENST00000589577 ALMS1Q8TCU4 4167 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 IGLV1-36A0A0B4J1U3 117 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 PLSCR5A0PG75 271 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 DAPL1A0PJW8 107 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 ANKRD61A6NGH8 418 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 DLGAP1O14490 977 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 RGS10O43665 173 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 ENTPD6O75354 484 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 TOX4O94842 621 aa4.98□□□□□ -1.61
VPS25-204ENST00000589577 KRT8P05787 483 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms