RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 MMP9P14780 707 aa13.34□□□□□ -0.27
CXXC1-209ENST00000587342 DCTDP32321 178 aa13.34□□□□□ -0.27
CXXC1-209ENST00000587342 COMPP49747 757 aaPredicted RBP13.34□□□□□ -0.27
CXXC1-209ENST00000587342 RASSF2P50749 326 aa13.34□□□□□ -0.27
CXXC1-209ENST00000587342 MZT1Q08AG7 82 aa13.34□□□□□ -0.27
CXXC1-209ENST00000587342 WDR38Q5JTN6 314 aa13.34□□□□□ -0.27
CXXC1-209ENST00000587342 BRD3OSQ6XYD6 125 aa13.34□□□□□ -0.27
CXXC1-209ENST00000587342 PLEKHG7Q6ZR37 379 aa13.34□□□□□ -0.27
CXXC1-209ENST00000587342 C9orf139Q6ZV77 190 aa13.34□□□□□ -0.27
CXXC1-209ENST00000587342 MEPCEQ7L2J0 689 aaKnown RBP13.34□□□□□ -0.27
CXXC1-209ENST00000587342 ZDHHC13Q8IUH4 622 aa13.34□□□□□ -0.27
CXXC1-209ENST00000587342 FAM216BQ8N7L0 139 aa13.34□□□□□ -0.27
CXXC1-209ENST00000587342 JMJD8Q96S16 334 aa13.34□□□□□ -0.27
CXXC1-209ENST00000587342 TBX15Q96SF7 602 aa13.34□□□□□ -0.27
CXXC1-209ENST00000587342 CCL13Q99616 98 aa13.34□□□□□ -0.27
CXXC1-209ENST00000587342 PBOV1Q9GZY1 135 aa13.34□□□□□ -0.27
CXXC1-209ENST00000587342 A0A0U1RQV5 110 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 TMEM269A0A1B0GVZ9 245 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 SAC3D1A6NKF1 404 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 SRRM5B3KS81 715 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 DVL1O14640 695 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 SELLP14151 372 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 CFPP27918 469 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 CFHR2P36980 270 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 NPY4RP50391 375 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 GMFBP60983 142 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 IL5RAQ01344 420 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 KCNJ8Q15842 424 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 NXNL2Q5VZ03 156 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 RUSC1-AS1Q66K80 236 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 DEGS2Q6QHC5 323 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 KRT74Q7RTS7 529 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 SSX6Q7RTT6 188 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 SLC35F2Q8IXU6 374 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 ZNF679Q8IYX0 411 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 SCCPDHQ8NBX0 429 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 OR51E1Q8TCB6 317 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 PIGCQ92535 297 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 TAF15Q92804 592 aaKnown RBP eCLIP13.33□□□□□ -0.28
CXXC1-209ENST00000587342 APOL4Q9BPW4 351 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 MICU1Q9BPX6 476 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 RTL8AQ9BWD3 113 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 GABARAPL3Q9BY60 117 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 GPR84Q9NQS5 396 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 ERVK-18Q9QC07 812 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 KAAG1Q9UBP8 84 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 MPC1Q9Y5U8 109 aa13.33□□□□□ -0.28
CXXC1-209ENST00000587342 ANXA2P2A6NMY6 339 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 H3BNX3 289 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 HAX1O00165 279 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 TMPRSS2O15393 492 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 RHBDL1O75783 438 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 APOL3O95236 402 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 TTRP02766 147 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 FCGR1AP12314 374 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 CXCR4P61073 352 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 FAM76BQ5HYJ3 339 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 STUMQ69YW2 141 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 KCTD18Q6PI47 426 aaPredicted RBP13.32□□□□□ -0.28
CXXC1-209ENST00000587342 ZNF322Q6U7Q0 402 aaPredicted RBP13.32□□□□□ -0.28
CXXC1-209ENST00000587342 C12orf54Q6X4T0 127 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 ZDHHC23Q8IYP9 409 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 PYDC1Q8WXC3 89 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 ASB17Q8WXJ9 295 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 FAM71F1Q96KD3 344 aaPredicted RBP13.32□□□□□ -0.28
CXXC1-209ENST00000587342 MROQ9BYG7 248 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 PRRG3Q9BZD7 231 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 MS4A7Q9GZW8 240 aaPredicted RBP13.32□□□□□ -0.28
CXXC1-209ENST00000587342 SIRPDQ9H106 197 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 TRIM36Q9NQ86 728 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 NUFIP1Q9UHK0 495 aaKnown RBP13.32□□□□□ -0.28
CXXC1-209ENST00000587342 MRM2Q9UI43 246 aaKnown RBP13.32□□□□□ -0.28
CXXC1-209ENST00000587342 ZNF391Q9UJN7 358 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 IKZF2Q9UKS7 526 aa13.32□□□□□ -0.28
CXXC1-209ENST00000587342 ZNF816-ZNF321PA0A0X1KG74 233 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 ACOD1A6NK06 481 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 SLC22A31A6NKX4 558 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 ZNF879B4DU55 563 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 NDUFA2O43678 99 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 ZNF254O75437 659 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 MUC1P15941 1255 aaPredicted RBP13.31□□□□□ -0.28
CXXC1-209ENST00000587342 FAHP16930 419 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 PRTN3P24158 256 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 GPM6AP51674 278 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 SLC9A3R2Q15599 337 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 CEP78Q5JTW2 689 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 BTN2A1Q7KYR7 527 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 FTMTQ8N4E7 242 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 OR5T2Q8NGG2 359 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 ST8SIA4Q92187 359 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 GCDHQ92947 438 aaPredicted RBP13.31□□□□□ -0.28
CXXC1-209ENST00000587342 CENPNQ96H22 339 aaPredicted RBP13.31□□□□□ -0.28
CXXC1-209ENST00000587342 RNF170Q96K19 258 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 RAB3IPQ96QF0 476 aaPredicted RBP13.31□□□□□ -0.28
CXXC1-209ENST00000587342 PCGF1Q9BSM1 259 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 OSBPL10Q9BXB5 764 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 RIBC2Q9H4K1 309 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 SNTG1Q9NSN8 517 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 CLN6Q9NWW5 311 aa13.31□□□□□ -0.28
CXXC1-209ENST00000587342 A0A1B0GTI1 187 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms