RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 TMEM71Q6P5X7 295 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 CRIP3Q6Q6R5 217 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 DRAM2Q6UX65 266 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ZNF574Q6ZN55 896 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 BHLHE23Q8NDY6 225 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR5AC2Q9NZP5 309 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 GHRLQ9UBU3 117 aa12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ZNF629Q9UEG4 869 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-237ENST00000585163 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 LOC102725191A0A1B0GVB3 256 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 PRF1P14222 555 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 RPS2P15880 293 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 CTSSP25774 331 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR3A2P47893 321 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ACY1Q03154 408 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ECH1Q13011 328 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 EIF3IQ13347 325 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 KISS1Q15726 138 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 CPEB2Q7Z5Q1 589 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 PNLDC1Q8NA58 520 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR51T1Q8NGJ9 327 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 RHBDD1Q8TEB9 315 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR10C1Q96KK4 312 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ST6GALNAC5Q9BVH7 336 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SLC26A1Q9H2B4 701 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 CABIN1Q9Y6J0 2220 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 AQP7P3A6NL99 342 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ZNF726A6NNF4 738 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 IGLV3-1P01715 115 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SFTPDP35247 375 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 PTGFRP43088 359 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SNU13P55769 128 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 TAS2R46P59540 309 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 DCDP81605 110 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SCRN3Q0VDG4 424 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 IL15RAQ13261 267 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 PLEKHN1Q494U1 663 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ANKRD39Q53RE8 183 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 NSUN5P2Q63ZY6 315 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 C1QL2Q7Z5L3 287 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 LDLRAD3Q86YD5 345 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR4A4PQ8NGN8 299 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SLC25A43Q8WUT9 341 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 C2orf50Q96LR7 162 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR6C1Q96RD1 312 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 MMP26Q9NRE1 261 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 CARHSP1Q9Y2V2 147 aaKnown RBP12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 MTCH2Q9Y6C9 303 aa12.49□□□□□ -0.41
CDK5RAP3-237ENST00000585163 C5orf63A6NC05 138 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SDCBPO00560 298 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 HTR3BO95264 441 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 KLK2P20151 261 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 GLRA1P23415 457 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 AFF3P51826 1226 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SRSF3P84103 164 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 TMEM176BQ3YBM2 270 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 DMRTC1Q5HYR2 192 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ZNF585AQ6P3V2 769 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 WDSUB1Q8N9V3 476 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 LYZL4Q96KX0 146 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 MICU1Q9BPX6 476 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 METTL8Q9H825 291 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 HPF1Q9NWY4 346 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 NDRG3Q9UGV2 375 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 HDGFL3Q9Y3E1 203 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 BCAT2O15382 392 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SCRG1O75711 98 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 CSTBP04080 98 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ADH6P28332 368 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 LSM6P62312 80 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 CSNK2A1P68400 391 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 RELQ04864 619 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 POC1AQ8NBT0 407 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 CSNK2A3Q8NEV1 391 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR5D18Q8NGL1 313 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 DNASE2BQ8WZ79 361 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 EHFQ9NZC4 300 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 DNAJB11Q9UBS4 358 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 LPAR3Q9UBY5 353 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 PRELID3BQ9Y3B1 194 aa12.48□□□□□ -0.41
CDK5RAP3-237ENST00000585163 ASCC3Q8N3C0 2202 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 FIGNL2A6NMB9 653 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 F8W036 122 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 DKK1O94907 266 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 PET100P0DJ07 73 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 BLVRBP30043 206 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 EIF1P41567 113 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 BLOC1S1P78537 153 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 RAB32Q13637 225 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SURF2Q15527 256 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 MST1LQ2TV78 715 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 TMEM88Q6PEY1 159 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 IL34Q6ZMJ4 242 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 FADS6Q8N9I5 356 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 OR51F2Q8NH61 342 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 EMG1Q92979 244 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SPACA9Q96E40 222 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 PGAM5Q96HS1 289 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 CNTNAP3BQ96NU0 1288 aa12.47□□□□□ -0.41
CDK5RAP3-237ENST00000585163 SPSB2Q99619 263 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms