RNA–Protein interactions for RNA: ENST00000584052.5

RIOK3-208, Transcript of RIO kinase 3, human

TSL 2

Gene RIOK3, Length 659 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIOK3-208	ENST00000584052	DDOST	P39656	456 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	NAA10	P41227	235 aa	Predicted RBP	12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	SNAPC1	Q16533	368 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	TIGD6	Q17RP2	521 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	C12orf73	Q69YU5	71 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	DPY19L4	Q7Z388	723 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	CPO	Q8IVL8	374 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	CMTM4	Q8IZR5	234 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	OR56B2P	Q8NGI1	322 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	OTULIN	Q96BN8	352 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	SLAMF6	Q96DU3	332 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	INTS14	Q96SY0	518 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	KCNJ15	Q99712	375 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	OPA3	Q9H6K4	179 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	SP140L	Q9H930	580 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	TCF7L1	Q9HCS4	588 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	S100A14	Q9HCY8	104 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052	USE1	Q9NZ43	259 aa		12.53	□□□□□ -0.4
RIOK3-208	ENST00000584052		A0A0U1RQK1	487 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	ZNF878	C9JN71	531 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	NDUFB3	O43676	98 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	GPR137B	O60478	399 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	IGHV4-59	P01825	116 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	GNAL	P38405	381 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	RPL15	P61313	204 aa	Known RBP	12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	RELB	Q01201	579 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	GABPB1	Q06547	395 aa	Predicted RBP	12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	CDON	Q4KMG0	1287 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	GDPGP1	Q6ZNW5	385 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	SHF	Q7M4L6	423 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	SLC36A1	Q7Z2H8	476 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	FAM90A1	Q86YD7	464 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	ERI1	Q8IV48	349 aa	Known RBP	12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	TIGD4	Q8IY51	512 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	OR6N2	Q8NGY6	317 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	LRRC29	Q8WV35	223 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	CCL13	Q99616	98 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	OR51V1	Q9H2C8	321 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	MMP27	Q9H306	513 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	SMURF1	Q9HCE7	757 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	TVP23B	Q9NYZ1	205 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	DNAJB11	Q9UBS4	358 aa		12.52	□□□□□ -0.41
RIOK3-208	ENST00000584052	PRKY	O43930	277 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	PAH	P00439	452 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	APOC1	P02654	83 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	ALPL	P05186	524 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	MMP9	P14780	707 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	EPHA2	P29317	976 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	GMFB	P60983	142 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	TAF9	Q16594	264 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	GFOD2	Q3B7J2	385 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	C11orf91	Q3C1V1	193 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	KLHL12	Q53G59	568 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	LCN1P1	Q5VSP4	162 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	VMO1	Q7Z5L0	202 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	PQLC1	Q8N2U9	271 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	GCSAM	Q8N6F7	178 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	BBS1	Q8NFJ9	593 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	H1FX	Q92522	213 aa	Known RBP	12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	CITED1	Q99966	193 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	BRD7	Q9NPI1	651 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	RPUSD1	Q9UJJ7	312 aa	Known RBP	12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052	TRRAP	Q9Y4A5	3859 aa		12.51	□□□□□ -0.41
RIOK3-208	ENST00000584052		A0A1B0GVI7	797 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	ANKRD61	A6NGH8	418 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	EI24	O14681	340 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	PTBP3	O95758	552 aa	Known RBP	12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	FBP1	P09467	338 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	MUC1	P15941	1255 aa	Predicted RBP	12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	IER3	P46695	156 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	ALDH3A2	P51648	485 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	GRB2	P62993	217 aa	Known RBP	12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	EFNB1	P98172	346 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	IKZF1	Q13422	519 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	APOF	Q13790	326 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	EIF2B1	Q14232	305 aa	Known RBP	12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	LRRC10	Q5BKY1	277 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	RHOU	Q7L0Q8	258 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	FTMT	Q8N4E7	242 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	ZNF454	Q8N9F8	522 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	LINC01006	Q8NI28	216 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	TMEM163	Q8TC26	289 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	RNF133	Q8WVZ7	376 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	REEP6	Q96HR9	211 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	MICU1	Q9BPX6	476 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	SIRPD	Q9H106	197 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	TOR3A	Q9H497	397 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	RNPEPL1	Q9HAU8	725 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052	KPTN	Q9Y664	436 aa		12.5	□□□□□ -0.41
RIOK3-208	ENST00000584052		A0A1W2PRD5	423 aa		12.49	□□□□□ -0.41
RIOK3-208	ENST00000584052		A0A1W2PRF3	423 aa		12.49	□□□□□ -0.41
RIOK3-208	ENST00000584052		A0A1W2PRM7	423 aa		12.49	□□□□□ -0.41
RIOK3-208	ENST00000584052	C5orf63	A6NC05	138 aa		12.49	□□□□□ -0.41
RIOK3-208	ENST00000584052	CCDC182	A6NF36	153 aa		12.49	□□□□□ -0.41
RIOK3-208	ENST00000584052	ANXA2P2	A6NMY6	339 aa		12.49	□□□□□ -0.41
RIOK3-208	ENST00000584052	SELENOF	O60613	162 aa		12.49	□□□□□ -0.41
RIOK3-208	ENST00000584052	LHB	P01229	141 aa		12.49	□□□□□ -0.41
RIOK3-208	ENST00000584052	CFL1	P23528	166 aa	Known RBP	12.49	□□□□□ -0.41
RIOK3-208	ENST00000584052	CX3CR1	P49238	355 aa		12.49	□□□□□ -0.41

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