RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 RAB11BQ15907 218 aa1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 TMEM236Q5W0B7 351 aa1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 MED27Q6P2C8 311 aa1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 DEGS2Q6QHC5 323 aa1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 TMCO2Q7Z6W1 182 aaPredicted RBP1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 ORMDL3Q8N138 153 aa1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 ZNF645Q8N7E2 425 aa1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 SLC25A29Q8N8R3 303 aa1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 OR2Z1Q8NG97 314 aa1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 APH1AQ96BI3 265 aa1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 RHOXF2Q9BQY4 288 aa1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 HEBP1Q9NRV9 189 aa1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 HMGXB4Q9UGU5 601 aa1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 CES1P1Q9UKY3 287 aa1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 SBNO1A3KN83 1393 aa1.97□□□□□ -2.09
PPP4R1-227ENST00000583988 CCL15-CCL14A0A0B4J2E2 113 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 OR6C70A6NIJ9 312 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 MFNGO00587 321 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 SMC2O95347 1197 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 LCA5LO95447 670 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 TTC4O95801 387 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 CATP04040 527 aaKnown RBP1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 IGLV7-43P04211 117 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 STAG3L3P0CL85 134 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 THRAP10827 490 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 GALR1P47211 349 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 C2orf54Q08AI8 447 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 DMC1Q14565 340 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 CCL15Q16663 113 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 C6orf99Q4VX62 202 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 KLHL12Q53G59 568 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 PIP5KL1Q5T9C9 394 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 OR2T5Q6IEZ7 315 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 MORN3Q6PF18 240 aaPredicted RBP1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 LINC00336Q6ZUF6 198 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 NDUFAF7Q7L592 441 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 MRPL21Q7Z2W9 205 aaKnown RBP1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 LINC00304Q8N9R0 145 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 TMEM104Q8NE00 496 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 ZNF680Q8NEM1 530 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 C1orf64Q8NEQ6 169 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 OR4M2Q8NGB6 313 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 OR2T29Q8NH02 315 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 SFXN5Q8TD22 340 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 CPNE4Q96A23 557 aaPredicted RBP1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 DYNLL2Q96FJ2 89 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 GPR82Q96P67 336 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 SCGB3A2Q96PL1 93 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 IL22Q9GZX6 179 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 DYRK4Q9NR20 520 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 PSME2Q9UL46 239 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 FARSAQ9Y285 508 aaKnown RBP1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 SIGLEC7Q9Y286 467 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 OR51B2Q9Y5P1 312 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 NPHP4O75161 1426 aaPredicted RBP1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 ZNF608Q9ULD9 1512 aaPredicted RBP1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 C2orf16Q68DN1 1984 aa1.96□□□□□ -2.1
PPP4R1-227ENST00000583988 MROH7Q68CQ1 1323 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 WDR19Q8NEZ3 1342 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 CEACAM18A8MTB9 384 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 HACD1B0YJ81 288 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 CCDC22O60826 627 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 IGKV4-1P06312 121 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 MMP7P09237 267 aaPredicted RBP1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 MSR1P21757 451 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 ARL2P36404 184 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 DAOAP59103 153 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 PPP1CAP62136 330 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 RPS11P62280 158 aaKnown RBP eCLIP1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 INCA1Q0VD86 236 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 MAPRE2Q15555 327 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 LUZP6Q538Z0 58 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 FAM104BQ5XKR9 115 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 ULK3Q6PHR2 472 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 STK40Q8N2I9 435 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 KIF2BQ8N4N8 673 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 LINC00469Q8N7U9 141 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 OR1P1Q8NH06 330 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 PEX13Q92968 403 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 ISOC2Q96AB3 205 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 ISG20Q96AZ6 181 aaKnown RBP1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 ZFP3Q96NJ6 502 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 ALS2CR12Q96Q35 445 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 NAPGQ99747 312 aaPredicted RBP1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 LHX5Q9H2C1 402 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 C8orf33Q9H7E9 229 aaPredicted RBP1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 RBFOX1Q9NWB1 397 aaKnown RBP1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 AHSPQ9NZD4 102 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 DDX19BQ9UMR2 479 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 SHROOM3Q8TF72 1996 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 LOXHD1Q8IVV2 1947 aa1.95□□□□□ -2.1
PPP4R1-227ENST00000583988 IGKV3D-11A0A0A0MRZ8 115 aa1.94□□□□□ -2.1
PPP4R1-227ENST00000583988 A0A1W2PRF3 423 aa1.94□□□□□ -2.1
PPP4R1-227ENST00000583988 A0A1W2PRM7 423 aa1.94□□□□□ -2.1
PPP4R1-227ENST00000583988 NCF1BA6NI72 391 aaPredicted RBP1.94□□□□□ -2.1
PPP4R1-227ENST00000583988 ZNF233A6NK53 670 aa1.94□□□□□ -2.1
PPP4R1-227ENST00000583988 VGLL3A8MV65 326 aa1.94□□□□□ -2.1
PPP4R1-227ENST00000583988 NCF1CA8MVU1 366 aaPredicted RBP1.94□□□□□ -2.1
PPP4R1-227ENST00000583988 ZNF99A8MXY4 864 aaPredicted RBP1.94□□□□□ -2.1
PPP4R1-227ENST00000583988 TRDMT1O14717 391 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms