RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 WDR86Q86TI4 376 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 FAM90A1Q86YD7 464 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 SLC35F2Q8IXU6 374 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 OR2T27Q8NH04 317 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 PYDC1Q8WXC3 89 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 OR5P3Q8WZ94 311 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 RFKQ969G6 155 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 HRASLS5Q96KN8 279 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 RTL8AQ9BWD3 113 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 PAPOLGQ9BWT3 736 aaKnown RBP8.24□□□□□ -1.09
SKA2-208ENST00000583927 PBOV1Q9GZY1 135 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 SEMA6AQ9H2E6 1030 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 C1orf123Q9NWV4 160 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 ERVK-18Q9QC07 812 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 NUP50Q9UKX7 468 aa8.24□□□□□ -1.09
SKA2-208ENST00000583927 hCG_1807616A0A1W2PRN6 198 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 OR5B21A6NL26 309 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 A6NLC8 198 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 ZNF670-ZNF695F2Z2N8 137 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.23□□□□□ -1.09
SKA2-208ENST00000583927 ENSAO43768 121 aaKnown RBP8.23□□□□□ -1.09
SKA2-208ENST00000583927 MTRF1O75570 445 aaKnown RBP8.23□□□□□ -1.09
SKA2-208ENST00000583927 SULT1C4O75897 302 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 DHRS3O75911 302 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 VENTXO95231 258 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 ECDO95905 644 aaPredicted RBP8.23□□□□□ -1.09
SKA2-208ENST00000583927 MRPL3P09001 348 aaKnown RBP8.23□□□□□ -1.09
SKA2-208ENST00000583927 POLR2IP36954 125 aaKnown RBP8.23□□□□□ -1.09
SKA2-208ENST00000583927 ALDH3A2P51648 485 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 RIPPLY1Q0D2K3 151 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 KPNB1Q14974 876 aaKnown RBP8.23□□□□□ -1.09
SKA2-208ENST00000583927 MICBQ29980 383 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 GFOD2Q3B7J2 385 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 CEACAM21Q3KPI0 293 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 ARMCX4Q5H9R4 360 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 KLF17Q5JT82 389 aaPredicted RBP8.23□□□□□ -1.09
SKA2-208ENST00000583927 ZNF684Q5T5D7 378 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 LYPD2Q6UXB3 125 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 ZNF826PQ6ZT77 177 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 BCDIN3DQ7Z5W3 292 aaKnown RBP8.23□□□□□ -1.09
SKA2-208ENST00000583927 EGFL6Q8IUX8 553 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 ZDHHC23Q8IYP9 409 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 ELMOD2Q8IZ81 293 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 OR5A2Q8NGI9 324 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 FAM216AQ8WUB2 273 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 HPSE2Q8WWQ2 592 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 IL4I1Q96RQ9 567 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 PKP2Q99959 881 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 NUDT16L1Q9BRJ7 211 aaKnown RBP8.23□□□□□ -1.09
SKA2-208ENST00000583927 KRTAP3-3Q9BYR6 98 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 KRTAP3-2Q9BYR7 98 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 CTSZQ9UBR2 303 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 ORC6Q9Y5N6 252 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 SNX5Q9Y5X3 404 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 R4GMQ9 66 aa8.23□□□□□ -1.09
SKA2-208ENST00000583927 SAC3D1A6NKF1 404 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 ZNF850A8MQ14 1090 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 C3orf80F5H4A9 247 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 LOC110117498-PIK3R3F6TDL0 507 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 M0R129 80 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 CDIPTO14735 213 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 ADAM20O43506 726 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 PLATP00750 562 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 TTRP02766 147 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 CCL1P22362 96 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 COMPP49747 757 aaPredicted RBP8.22□□□□□ -1.09
SKA2-208ENST00000583927 ISL1P61371 349 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 SNRPGP62308 76 aaKnown RBP8.22□□□□□ -1.09
SKA2-208ENST00000583927 GNG3P63215 75 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 MEDAGQ5VYS4 303 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 TMEM42Q69YG0 159 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 SFRP4Q6FHJ7 346 aaPredicted RBP8.22□□□□□ -1.09
SKA2-208ENST00000583927 DOK3Q7L591 496 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 SLC36A1Q7Z2H8 476 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 BPIFB2Q8N4F0 458 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 PNLDC1Q8NA58 520 aaKnown RBP8.22□□□□□ -1.09
SKA2-208ENST00000583927 SCCPDHQ8NBX0 429 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 CCDC54Q8NEL0 328 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 OR51G2Q8NGK0 314 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 FAM81AQ8TBF8 368 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 OR51E1Q8TCB6 317 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 LRRC29Q8WV35 223 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 PIGCQ92535 297 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 EME1Q96AY2 570 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 HIST1H2AAQ96QV6 131 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 RIBC2Q9H4K1 309 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 PPP1R3EQ9H7J1 279 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 ZMAT3Q9HA38 289 aaKnown RBP8.22□□□□□ -1.09
SKA2-208ENST00000583927 GPR84Q9NQS5 396 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 MRM2Q9UI43 246 aaKnown RBP8.22□□□□□ -1.09
SKA2-208ENST00000583927 IKZF2Q9UKS7 526 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.22□□□□□ -1.09
SKA2-208ENST00000583927 V9GYS6 101 aa8.22□□□□□ -1.09
SKA2-208ENST00000583927 A0A1B0GTI1 187 aa8.21□□□□□ -1.1
SKA2-208ENST00000583927 A0A1W2PQL4 384 aaPredicted RBP8.21□□□□□ -1.1
SKA2-208ENST00000583927 C22orf46C9J442 243 aa8.21□□□□□ -1.1
SKA2-208ENST00000583927 TRIM77I1YAP6 450 aa8.21□□□□□ -1.1
SKA2-208ENST00000583927 J3QRE1 110 aa8.21□□□□□ -1.1
SKA2-208ENST00000583927 PSMD9O00233 223 aa8.21□□□□□ -1.1
SKA2-208ENST00000583927 DLGAP1O14490 977 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms