RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 OR6V1Q8N148 313 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 LNX2Q8N448 690 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 GCSAMQ8N6F7 178 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 ZSCAN4Q8NAM6 433 aaPredicted RBP6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 SLC26A10Q8NG04 563 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 OR2AE1Q8NHA4 323 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 FANK1Q8TC84 345 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 SPSB4Q96A44 273 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 ERMAPQ96PL5 475 aaPredicted RBP6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 NMNAT3Q96T66 252 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 ANKRD19PQ9H560 264 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 RPRD1BQ9NQG5 326 aaKnown RBP6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 C1orf123Q9NWV4 160 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 AURKCQ9UQB9 309 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 ENPP4Q9Y6X5 453 aa6.41□□□□□ -1.38
SMCHD1-210ENST00000583800 A0A1W2PRD5 423 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 A0A1W2PRF3 423 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 A0A1W2PRM7 423 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 hCG_1807616A0A1W2PRN6 198 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 GGT3PA6NGU5 568 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 CD300LBA8K4G0 201 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 G3V4G9 280 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 M0R135 149 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 NME4O00746 187 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 DIRAS1O95057 198 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 PTBP3O95758 552 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 RENP00797 406 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 GASTP01350 101 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 HLA-DQA2P01906 255 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 GRPP07492 148 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 TROVE2P10155 538 aaKnown RBP eCLIP6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 PSKH1P11801 424 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 NCK1P16333 377 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 HIST1H1CP16403 213 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 GGT2P36268 569 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 RPS27P42677 84 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 SLC7A2P52569 658 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 DLX1P56177 255 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 TPTEP56180 551 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 ZNF92Q03936 586 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 DGCR6Q14129 220 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 C2orf68Q2NKX9 166 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 RFX4Q33E94 735 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 GLYATL3Q5SZD4 288 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 CGB2Q6NT52 195 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 SMARCD3Q6STE5 483 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 ARPINQ7Z6K5 226 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 CCDC28AQ8IWP9 274 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 SLC15A3Q8IY34 581 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 SDR9C7Q8NEX9 313 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 OR2AJ1Q8NGZ0 328 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 OR4K13Q8NH42 304 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 OR52J3Q8NH60 311 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 FAM162AQ96A26 154 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 RNF125Q96EQ8 232 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 ZNF799Q96GE5 643 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 KRTAP17-1Q9BYP8 105 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 SLC22A4Q9H015 551 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 OR52D1Q9H346 318 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 DPAGT1Q9H3H5 408 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 C16orf95Q9H693 158 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 TRIM36Q9NQ86 728 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 SIRT7Q9NRC8 400 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 ADA2Q9NZK5 511 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 ZNRD1Q9P1U0 126 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 ONECUT1Q9UBC0 465 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 DNAJB11Q9UBS4 358 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 CYB5R1Q9UHQ9 305 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 RPUSD1Q9UJJ7 312 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 CAPN7Q9Y6W3 813 aa6.4□□□□□ -1.38
SMCHD1-210ENST00000583800 ZNF816-ZNF321PA0A0X1KG74 233 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 A0A1B0GVI7 797 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 OR6C68A6NDL8 312 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 BTBD17A6NE02 478 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 NDUFA2O43678 99 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 GMDSO60547 372 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 SCGB1D1O95968 90 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 PRB2P02812 416 aaPredicted RBP6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 FBP1P09467 338 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 SLC2A1P11166 492 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 GSK3BP49841 420 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 UCP3P55916 312 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 ECH1Q13011 328 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 KLRD1Q13241 179 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 BEAN1Q3B7T3 259 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 SLC36A3Q495N2 470 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 CDONQ4KMG0 1287 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 TEX36Q5VZQ5 186 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 WDR86Q86TI4 376 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 FAM216BQ8N7L0 139 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 FAM86B1Q8N7N1 296 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 DTX3Q8N9I9 347 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 OR56B2PQ8NGI1 322 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 CCL13Q99616 98 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 IFT27Q9BW83 186 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 C11orf54Q9H0W9 315 aaPredicted RBP6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 KRCC1Q9NPI7 259 aaPredicted RBP6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 FGFR1OP2Q9NVK5 253 aa6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 MRPL22Q9NWU5 206 aaKnown RBP6.39□□□□□ -1.39
SMCHD1-210ENST00000583800 MRPL15Q9P015 296 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms