RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 FJX1Q86VR8 437 aa19.75■□□□□ 0.75
CCDC47-204ENST00000582252 BEST4Q8NFU0 473 aa19.75■□□□□ 0.75
CCDC47-204ENST00000582252 SLC25A21Q9BQT8 299 aaPredicted RBP19.75■□□□□ 0.75
CCDC47-204ENST00000582252 DEFB127Q9H1M4 99 aa19.75■□□□□ 0.75
CCDC47-204ENST00000582252 ZDHHC11Q9H8X9 412 aa19.75■□□□□ 0.75
CCDC47-204ENST00000582252 ZNF407Q9C0G0 2248 aa19.75■□□□□ 0.75
CCDC47-204ENST00000582252 RGS13O14921 159 aa19.74■□□□□ 0.75
CCDC47-204ENST00000582252 CD74P04233 296 aa19.74■□□□□ 0.75
CCDC47-204ENST00000582252 PRKACBP22694 351 aa19.74■□□□□ 0.75
CCDC47-204ENST00000582252 UBE2V2Q15819 145 aa19.74■□□□□ 0.75
CCDC47-204ENST00000582252 NCCRP1Q6ZVX7 275 aaPredicted RBP19.74■□□□□ 0.75
CCDC47-204ENST00000582252 ZNF100Q8IYN0 542 aa19.74■□□□□ 0.75
CCDC47-204ENST00000582252 STEAP2Q8NFT2 490 aa19.74■□□□□ 0.75
CCDC47-204ENST00000582252 OR51S1Q8NGJ8 323 aa19.74■□□□□ 0.75
CCDC47-204ENST00000582252 ZFAND1Q8TCF1 268 aa19.74■□□□□ 0.75
CCDC47-204ENST00000582252 C1orf147Q96MC9 270 aaPredicted RBP19.74■□□□□ 0.75
CCDC47-204ENST00000582252 ZMAT3Q9HA38 289 aaKnown RBP19.74■□□□□ 0.75
CCDC47-204ENST00000582252 GP6Q9HCN6 339 aa19.74■□□□□ 0.75
CCDC47-204ENST00000582252 IFT46Q9NQC8 304 aa19.74■□□□□ 0.75
CCDC47-204ENST00000582252 RAXQ9Y2V3 346 aa19.74■□□□□ 0.75
CCDC47-204ENST00000582252 LIPGQ9Y5X9 500 aa19.74■□□□□ 0.75
CCDC47-204ENST00000582252 MEIKINA0A087WXM9 373 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 TRAV17A0A0B4J275 112 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 DISC1C4P0D8 188 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 CRTAPO75718 401 aaPredicted RBP19.73■□□□□ 0.75
CCDC47-204ENST00000582252 IGHV3-9P01782 118 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 PATE4P0C8F1 98 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 FCGR2AP12318 317 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 ZMYND11Q15326 602 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 PRDM14Q9GZV8 571 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 NPDC1Q9NQX5 325 aaPredicted RBP19.73■□□□□ 0.75
CCDC47-204ENST00000582252 UBE2QL1A1L167 161 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 HPXP02790 462 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 COX5BP10606 129 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 NAT2P11245 290 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 TBPP20226 339 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 RAD52P43351 418 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 GNG2P59768 71 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 ARL6IP1Q15041 203 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 PNLIPRP3Q17RR3 467 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 PABPC1L2AQ5JQF8 200 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 PIAS4Q8N2W9 510 aaPredicted RBP19.73■□□□□ 0.75
CCDC47-204ENST00000582252 OR4D10Q8NGI6 311 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 CCDC107Q8WV48 283 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 TNFAIP8L1Q8WVP5 186 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 DVL3Q92997 716 aaPredicted RBP19.73■□□□□ 0.75
CCDC47-204ENST00000582252 RAB3CQ96E17 227 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 WDYHV1Q96HA8 205 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 SELENOIQ9C0D9 397 aa19.73■□□□□ 0.75
CCDC47-204ENST00000582252 PYCARD-AS1I3L0S3 204 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 ATP6V1G1O75348 118 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 AMY2AP04746 511 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 RLN1P04808 185 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 ANXA7P20073 488 aaKnown RBP19.72■□□□□ 0.75
CCDC47-204ENST00000582252 HGFACQ04756 655 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 ZNF626Q68DY1 528 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 IGFL3Q6UXB1 125 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 ZADH2Q8N4Q0 377 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 FGFBP3Q8TAT2 258 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 NPRL2Q8WTW4 380 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 TECTBQ96PL2 329 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 SLA2Q9H6Q3 261 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 PLEKHA6Q9Y2H5 1048 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 ZNF175Q9Y473 711 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 CSAG2Q9Y5P2 127 aa19.72■□□□□ 0.75
CCDC47-204ENST00000582252 MKRN2OSH3BPM6 223 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 FABP7O15540 132 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 IFITM2Q01629 132 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 SLC22A6Q4U2R8 563 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 RNASE10Q5GAN6 216 aaKnown RBP19.71■□□□□ 0.75
CCDC47-204ENST00000582252 CLVS2Q5SYC1 327 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 DPPA2Q7Z7J5 298 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 SPICQ8N5J4 248 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 TMEM104Q8NE00 496 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 OR2AE1Q8NHA4 323 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 CMBLQ96DG6 245 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 PRRT1Q99946 306 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 ZNF69Q9UC07 566 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 MAP1BP46821 2468 aaKnown RBP19.71■□□□□ 0.75
CCDC47-204ENST00000582252 HIST1H1DP16402 221 aaKnown RBP19.71■□□□□ 0.75
CCDC47-204ENST00000582252 GNB3P16520 340 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 ARR3P36575 388 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 CBX5P45973 191 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 RPS27AP62979 156 aaKnown RBP19.71■□□□□ 0.75
CCDC47-204ENST00000582252 C3AR1Q16581 482 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 ZBTB37Q5TC79 503 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 TMEM53Q6P2H8 277 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 LHFPL2Q6ZUX7 228 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 RNF144BQ7Z419 303 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 BPIFB2Q8N4F0 458 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 ASCC1Q8N9N2 400 aaKnown RBP19.71■□□□□ 0.75
CCDC47-204ENST00000582252 SEC22CQ9BRL7 303 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 TMEM246Q9BRR3 403 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 C1QTNF5Q9BXJ0 243 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 BANF2Q9H503 90 aa19.71■□□□□ 0.75
CCDC47-204ENST00000582252 WIPF3A6NGB9 483 aa19.7■□□□□ 0.74
CCDC47-204ENST00000582252 SLC22A20A6NK97 555 aa19.7■□□□□ 0.74
CCDC47-204ENST00000582252 NDUFA5Q16718 116 aa19.7■□□□□ 0.74
CCDC47-204ENST00000582252 OR51T1Q8NGJ9 327 aa19.7■□□□□ 0.74
CCDC47-204ENST00000582252 PIGTQ969N2 578 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms