RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 RIOK2Q9BVS4 552 aaKnown RBP2.47□□□□□ -2.01
KPNB1-208ENST00000580019 OCR1Q9BZK8 76 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 TOLLIPQ9H0E2 274 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 RNF167Q9H6Y7 350 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 ZNF442Q9H7R0 627 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 ZDHHC4Q9NPG8 344 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 IFT46Q9NQC8 304 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 FGFR1OP2Q9NVK5 253 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 CALYQ9NYX4 217 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 IL37Q9NZH6 218 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 SHPKQ9UHJ6 478 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 CLEC4EQ9ULY5 219 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 TFR2Q9UP52 801 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 SNX24Q9Y343 169 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 USH1CQ9Y6N9 552 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 A0A1W2PP64 1363 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 RTL1A6NKG5 1358 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 ZSWIM8A7E2V4 1837 aa2.47□□□□□ -2.01
KPNB1-208ENST00000580019 CACNA1HO95180 2353 aa2.46□□□□□ -2.01
KPNB1-208ENST00000580019 FER1L5A0AVI2 2057 aa2.46□□□□□ -2.01
KPNB1-208ENST00000580019 DMDP11532 3685 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 PRR23AA6NEV1 266 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 A6NIZ1 184 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 ERVV-1B6SEH8 477 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 C9J4A7 227 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 ANKRD65E5RJM6 399 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 M0QZ92 97 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 ZNF593O00488 134 aaPredicted RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 ATP8B1O43520 1251 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 DENRO43583 198 aaKnown RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 CYTH3O43739 400 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 SLC16A7O60669 478 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 CLDN1O95832 211 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 PTTG1O95997 202 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 OXTP01178 125 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 IFNA5P01569 189 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 HLA-DRAP01903 254 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 OR5AL1P0C617 328 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 HIST1H1CP16403 213 aaKnown RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 CAPN2P17655 700 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 TCP1P17987 556 aaKnown RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 PVALBP20472 110 aaPredicted RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 ZP3P21754 424 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 VDAC1P21796 283 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 USF1P22415 310 aaPredicted RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 CHRNB4P30926 498 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 NTSP30990 170 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 RPA3P35244 121 aaPredicted RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 HRH1P35367 487 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 SERPINB5P36952 375 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 COILP38432 576 aaPredicted RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 HCAR3P49019 387 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 RAB7AP51149 207 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 FABP6P51161 128 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 AP2S1P53680 142 aaPredicted RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 RAP1BP61224 184 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 CKAP4Q07065 602 aaKnown RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 ELAVL2Q12926 359 aaKnown RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 SLC10A1Q14973 349 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 TMED2Q15363 201 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 SHHQ15465 462 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 SIX1Q15475 284 aaPredicted RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 TRIP13Q15645 432 aaPredicted RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 ATP6AP1Q15904 470 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 ZNF726P1Q15940 193 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 GCSAMLQ5JQS6 135 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 HBMQ6B0K9 141 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 FAM45BPQ6NSW5 357 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 UFSP1Q6NVU6 142 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 SPSB3Q6PJ21 355 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 PRSS57Q6UWY2 283 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 DRAM2Q6UX65 266 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 Q6ZT83 130 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 TMUB2Q71RG4 321 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 C17orf82Q86X59 251 aaPredicted RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 RDH10Q8IZV5 341 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 DAW1Q8N136 415 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 SLC22A18ASQ8N1D0 253 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 CBR4Q8N4T8 237 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 RFLNBQ8N5W9 214 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 MDS2Q8NDY4 140 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 OR10G3Q8NGC4 313 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 OR5D18Q8NGL1 313 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 OR6Q1Q8NGQ2 317 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 ERMNQ8TAM6 284 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 OR51E1Q8TCB6 317 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 PHOSPHO2Q8TCD6 241 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 FAM45AQ8TCE6 357 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 DYNC2LI1Q8TCX1 351 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 AGAP11Q8TF27 550 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 SSC4DQ8WTU2 575 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 RASL10AQ92737 203 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 TMEM230Q96A57 120 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 ZNF524Q96C55 264 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 FLYWCH2Q96CP2 140 aaKnown RBP2.46□□□□□ -2.02
KPNB1-208ENST00000580019 SLC25A38Q96DW6 304 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 SGTBQ96EQ0 304 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 WDR34Q96EX3 536 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 CCDC42Q96M95 316 aa2.46□□□□□ -2.02
KPNB1-208ENST00000580019 RILPQ96NA2 401 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms