RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 C19orf18Q8NEA5 215 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 OR51G2Q8NGK0 314 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 OR10Z1Q8NGY1 313 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 OR2T27Q8NH04 317 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 FAM81AQ8TBF8 368 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 ZFAND2BQ8WV99 257 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 OR5P3Q8WZ94 311 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 PIGCQ92535 297 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 RFKQ969G6 155 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 EME1Q96AY2 570 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 APOL4Q9BPW4 351 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 C19orf24Q9BVV8 132 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 SUCNR1Q9BXA5 334 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 KAAG1Q9UBP8 84 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 R4GMQ9 66 aa12.37□□□□□ -0.43
SS18-212ENST00000579061 KIR2DS1A0A191URI9 304 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 SRRM5B3KS81 715 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 E9PQ18 207 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 C3orf80F5H4A9 247 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 LOC110117498-PIK3R3F6TDL0 507 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 ADAM20O43506 726 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 MTRF1O75570 445 aaKnown RBP12.36□□□□□ -0.43
SS18-212ENST00000579061 FPR2P25090 351 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 CSNK2BP67870 215 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 RIPPLY1Q0D2K3 151 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 TUSC1Q2TAM9 212 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 ARMCX4Q5H9R4 360 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 SLC25A30Q5SVS4 291 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 CD276Q5ZPR3 534 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 ELMOD2Q8IZ81 293 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 SEMA6DQ8NFY4 1073 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 OR51E1Q8TCB6 317 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 LRRC29Q8WV35 223 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 HPSE2Q8WWQ2 592 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 C12orf43Q96C57 262 aaKnown RBP12.36□□□□□ -0.43
SS18-212ENST00000579061 RNF170Q96K19 258 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 HIST1H2AAQ96QV6 131 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 JMJD8Q96S16 334 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 C9orf16Q9BUW7 83 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 TTTY10Q9BZA0 68 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 PPP1R3EQ9H7J1 279 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 S100A14Q9HCY8 104 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 GPR84Q9NQS5 396 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 IMPAD1Q9NX62 359 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 MRM2Q9UI43 246 aaKnown RBP12.36□□□□□ -0.43
SS18-212ENST00000579061 SNX5Q9Y5X3 404 aa12.36□□□□□ -0.43
SS18-212ENST00000579061 CDIPTO14735 213 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 ENSAO43768 121 aaKnown RBP12.35□□□□□ -0.43
SS18-212ENST00000579061 DHRS3O75911 302 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 VENTXO95231 258 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 TTRP02766 147 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 KRT8P05787 483 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 LIPFP07098 398 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 EGR1P18146 543 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 HILS1P60008 231 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 HOXA4Q00056 320 aaPredicted RBP12.35□□□□□ -0.43
SS18-212ENST00000579061 SRSF2Q01130 221 aaKnown RBP12.35□□□□□ -0.43
SS18-212ENST00000579061 MFGE8Q08431 387 aaPredicted RBP12.35□□□□□ -0.43
SS18-212ENST00000579061 MICBQ29980 383 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 CEACAM21Q3KPI0 293 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 Q6ZSR3 168 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 THAP5Q7Z6K1 395 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 COMMD2Q86X83 199 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 FAM90A1Q86YD7 464 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 BPIFB2Q8N4F0 458 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 UPRTQ96BW1 309 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 NUDT16L1Q9BRJ7 211 aaKnown RBP12.35□□□□□ -0.43
SS18-212ENST00000579061 CTSZQ9UBR2 303 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 OR52A1Q9UKL2 312 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 NUP50Q9UKX7 468 aa12.35□□□□□ -0.43
SS18-212ENST00000579061 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.35□□□□□ -0.43
SS18-212ENST00000579061 OR5B21A6NL26 309 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 DHRS7CA6NNS2 312 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 SULT1C4O75897 302 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 GYPAP02724 150 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 ATP6V1E1P36543 226 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 SNRPGP62308 76 aaKnown RBP12.34□□□□□ -0.43
SS18-212ENST00000579061 GNG3P63215 75 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 KLF17Q5JT82 389 aaPredicted RBP12.34□□□□□ -0.43
SS18-212ENST00000579061 ZNF684Q5T5D7 378 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 BCL2L15Q5TBC7 163 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 MEDAGQ5VYS4 303 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 PLEKHG7Q6ZR37 379 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 SSX6Q7RTT6 188 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 CBR4Q8N4T8 237 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 SCCPDHQ8NBX0 429 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 OR5A2Q8NGI9 324 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 PPP1R14AQ96A00 147 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 FAM71F1Q96KD3 344 aaPredicted RBP12.34□□□□□ -0.43
SS18-212ENST00000579061 FGF23Q9GZV9 251 aaPredicted RBP12.34□□□□□ -0.43
SS18-212ENST00000579061 DNTTIP1Q9H147 329 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 ENPP5Q9UJA9 477 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 V9GYS6 101 aa12.34□□□□□ -0.43
SS18-212ENST00000579061 A0A1W2PQL4 384 aaPredicted RBP12.33□□□□□ -0.44
SS18-212ENST00000579061 METTL15A6NJ78 407 aa12.33□□□□□ -0.44
SS18-212ENST00000579061 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.33□□□□□ -0.44
SS18-212ENST00000579061 MAGEB4O15481 346 aaPredicted RBP12.33□□□□□ -0.44
SS18-212ENST00000579061 ECDO95905 644 aaPredicted RBP12.33□□□□□ -0.44
SS18-212ENST00000579061 MTNR1AP48039 350 aa12.33□□□□□ -0.44
SS18-212ENST00000579061 OCLNQ16625 522 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms