RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 DUX4L2P0CJ85 424 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 DUX4L3P0CJ86 424 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 DUX4L4P0CJ87 422 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 DUX4L5P0CJ88 424 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 DUX4L6P0CJ89 424 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 DUX4L7P0CJ90 424 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 PRKACGP22612 351 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 CBX1P83916 185 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 PRDX4Q13162 271 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 STUMQ69YW2 141 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 DUX4L9Q6RFH8 374 aaPredicted RBP18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 SLC36A1Q7Z2H8 476 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 SPATA24Q86W54 205 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 OR8B12Q8NGG6 310 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 ST8SIA4Q92187 359 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 ITFG2Q969R8 447 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 TMIGD2Q96BF3 282 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 NRBF2Q96F24 287 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 CCL13Q99616 98 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 DNTTIP1Q9H147 329 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 ACOXLQ9NUZ1 547 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 DUX4Q9UBX2 424 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 LRP12Q9Y561 859 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 POMT1Q9Y6A1 747 aa18.84■□□□□ 0.61
CDKN2A-212ENST00000578845 IGHV1-69DA0A0B4J2H0 117 aa18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 GYG2O15488 501 aa18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 IGHV1-69P01742 117 aa18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 MELTFP08582 738 aa18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 AMY2BP19961 511 aa18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 TGM4P49221 684 aa18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 ELF3P78545 371 aaPredicted RBP18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 CDONQ4KMG0 1287 aa18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 DEGS2Q6QHC5 323 aa18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 HPSE2Q8WWQ2 592 aa18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 SLC7A6OSQ96CW6 309 aaPredicted RBP18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 PKP2Q99959 881 aa18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 TEX12Q9BXU0 123 aa18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 YIPF3Q9GZM5 350 aa18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 FGF23Q9GZV9 251 aaPredicted RBP18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 CNTD2Q9H8S5 307 aa18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 POMPQ9Y244 141 aa18.83■□□□□ 0.6
CDKN2A-212ENST00000578845 A0A0U1RQV5 110 aa18.82■□□□□ 0.6
CDKN2A-212ENST00000578845 ACOD1A6NK06 481 aa18.82■□□□□ 0.6
CDKN2A-212ENST00000578845 ZNF850A8MQ14 1090 aa18.82■□□□□ 0.6
CDKN2A-212ENST00000578845 MDKP21741 143 aaPredicted RBP18.82■□□□□ 0.6
CDKN2A-212ENST00000578845 ARF6P62330 175 aa18.82■□□□□ 0.6
CDKN2A-212ENST00000578845 TMEM236Q5W0B7 351 aa18.82■□□□□ 0.6
CDKN2A-212ENST00000578845 FAHD1Q6P587 224 aa18.82■□□□□ 0.6
CDKN2A-212ENST00000578845 FGFRL1Q8N441 504 aa18.82■□□□□ 0.6
CDKN2A-212ENST00000578845 FAM216BQ8N7L0 139 aa18.82■□□□□ 0.6
CDKN2A-212ENST00000578845 TAF15Q92804 592 aaKnown RBP eCLIP18.82■□□□□ 0.6
CDKN2A-212ENST00000578845 SEH1LQ96EE3 360 aa18.82■□□□□ 0.6
CDKN2A-212ENST00000578845 RAB3IPQ96QF0 476 aaPredicted RBP18.82■□□□□ 0.6
CDKN2A-212ENST00000578845 HAO2Q9NYQ3 351 aa18.82■□□□□ 0.6
CDKN2A-212ENST00000578845 LAMP5Q9UJQ1 280 aa18.82■□□□□ 0.6
CDKN2A-212ENST00000578845 A0A1B0GUS0 222 aa18.81■□□□□ 0.6
CDKN2A-212ENST00000578845 FAM181BA6NEQ2 426 aa18.81■□□□□ 0.6
CDKN2A-212ENST00000578845 DCTDP32321 178 aa18.81■□□□□ 0.6
CDKN2A-212ENST00000578845 RPL15P61313 204 aaKnown RBP18.81■□□□□ 0.6
CDKN2A-212ENST00000578845 RPS7P62081 194 aaKnown RBP18.81■□□□□ 0.6
CDKN2A-212ENST00000578845 APOFQ13790 326 aa18.81■□□□□ 0.6
CDKN2A-212ENST00000578845 METAP1DQ6UB28 335 aaPredicted RBP18.81■□□□□ 0.6
CDKN2A-212ENST00000578845 ZDHHC23Q8IYP9 409 aa18.81■□□□□ 0.6
CDKN2A-212ENST00000578845 KIR3DL3Q8N743 410 aa18.81■□□□□ 0.6
CDKN2A-212ENST00000578845 C8orf46Q8TAG6 207 aa18.81■□□□□ 0.6
CDKN2A-212ENST00000578845 SSMEM1Q8WWF3 244 aa18.81■□□□□ 0.6
CDKN2A-212ENST00000578845 LHX4Q969G2 390 aa18.81■□□□□ 0.6
CDKN2A-212ENST00000578845 CHIAQ9BZP6 476 aa18.81■□□□□ 0.6
CDKN2A-212ENST00000578845 FAM206AQ9NX38 181 aa18.81■□□□□ 0.6
CDKN2A-212ENST00000578845 A0A1B0GVI7 797 aa18.8■□□□□ 0.6
CDKN2A-212ENST00000578845 CCDC182A6NF36 153 aa18.8■□□□□ 0.6
CDKN2A-212ENST00000578845 CRISP1P54107 249 aa18.8■□□□□ 0.6
CDKN2A-212ENST00000578845 ROM1Q03395 351 aa18.8■□□□□ 0.6
CDKN2A-212ENST00000578845 SNAPC1Q16533 368 aa18.8■□□□□ 0.6
CDKN2A-212ENST00000578845 KCTD18Q6PI47 426 aaPredicted RBP18.8■□□□□ 0.6
CDKN2A-212ENST00000578845 KRT77Q7Z794 578 aa18.8■□□□□ 0.6
CDKN2A-212ENST00000578845 LDLRAD3Q86YD5 345 aa18.8■□□□□ 0.6
CDKN2A-212ENST00000578845 SCCPDHQ8NBX0 429 aa18.8■□□□□ 0.6
CDKN2A-212ENST00000578845 RPL3LQ92901 407 aaKnown RBP18.8■□□□□ 0.6
CDKN2A-212ENST00000578845 TEAD3Q99594 435 aa18.8■□□□□ 0.6
CDKN2A-212ENST00000578845 WDR13Q9H1Z4 485 aa18.8■□□□□ 0.6
CDKN2A-212ENST00000578845 PAPOLBQ9NRJ5 636 aaKnown RBP18.8■□□□□ 0.6
CDKN2A-212ENST00000578845 ZNF816-ZNF321PA0A0X1KG74 233 aa18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 NDUFB3O43676 98 aa18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 DNAJC8O75937 253 aaPredicted RBP18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 NDUFA7O95182 113 aa18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 IGLV3-1P01715 115 aa18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 ATP6V1B1P15313 513 aa18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 LCN1P1Q5VSP4 162 aa18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 FIP1L1Q6UN15 594 aaKnown RBP18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 ZNF788Q6ZQV5 615 aa18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 VMO1Q7Z5L0 202 aa18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 PIGCQ92535 297 aa18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 UTP4Q969X6 686 aaKnown RBP18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 RNF170Q96K19 258 aa18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 DCTN5Q9BTE1 182 aa18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 FAM53CQ9NYF3 392 aa18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 TVP23BQ9NYZ1 205 aa18.79■□□□□ 0.6
CDKN2A-212ENST00000578845 ZNF254O75437 659 aa18.78■□□□□ 0.6
CDKN2A-212ENST00000578845 MAP2K3P46734 347 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms