RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 DNAJC9-AS1A6NH13 148 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 ANXA2P2A6NMY6 339 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 LOC110117498-PIK3R3F6TDL0 507 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 SLC16A6O15403 523 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 MAGEB4O15481 346 aaPredicted RBP13.39□□□□□ -0.27
VAPA-204ENST00000577901 SULT1C4O75897 302 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 APOL3O95236 402 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 PTBP3O95758 552 aaKnown RBP13.39□□□□□ -0.27
VAPA-204ENST00000577901 GRPP07492 148 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 ATP6V1B1P15313 513 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 PRTN3P24158 256 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 PMELP40967 661 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 MAP2K3P46734 347 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 ACTC1P68032 377 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 ACTA1P68133 377 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 ZMYND11Q15326 602 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 PRAMEF6Q5VXH4 476 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 GALNT4Q8N4A0 578 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 YIPF7Q8N8F6 280 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 RNFT2Q96EX2 444 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 LYZL4Q96KX0 146 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 DUX5Q96PT3 197 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 ZMAT3Q9HA38 289 aaKnown RBP13.39□□□□□ -0.27
VAPA-204ENST00000577901 ABCB9Q9NP78 766 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 UFSP2Q9NUQ7 469 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 ZNF69Q9UC07 566 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 NUFIP1Q9UHK0 495 aaKnown RBP13.39□□□□□ -0.27
VAPA-204ENST00000577901 MRM2Q9UI43 246 aaKnown RBP13.39□□□□□ -0.27
VAPA-204ENST00000577901 GTF2A1LQ9UNN4 478 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 RHBDD3Q9Y3P4 386 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 SNX5Q9Y5X3 404 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 AUP1Q9Y679 476 aa13.39□□□□□ -0.27
VAPA-204ENST00000577901 METTL15A6NJ78 407 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 TRAPPC2LH3BP13 241 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 MTRF1O75570 445 aaKnown RBP13.38□□□□□ -0.27
VAPA-204ENST00000577901 FSTL3O95633 263 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 CST4P01036 141 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 CPT2P23786 658 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 IL5RAQ01344 420 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 ZNF154Q13106 437 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 BAMBIQ13145 260 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 MPPED2Q15777 294 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 LRRC36Q1X8D7 754 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 KLF17Q5JT82 389 aaPredicted RBP13.38□□□□□ -0.27
VAPA-204ENST00000577901 BCL2L15Q5TBC7 163 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 PLEKHG7Q6ZR37 379 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 ENTHD1Q8IYW4 607 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 BCL6BQ8N143 479 aaPredicted RBP13.38□□□□□ -0.27
VAPA-204ENST00000577901 PACRGLQ8N7B6 248 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 RHOXF1Q8NHV9 184 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 HIST1H2AAQ96QV6 131 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 MYCBPQ99417 103 aaPredicted RBP13.38□□□□□ -0.27
VAPA-204ENST00000577901 MICU1Q9BPX6 476 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 GPR84Q9NQS5 396 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 RNF7Q9UBF6 113 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 OR52A1Q9UKL2 312 aa13.38□□□□□ -0.27
VAPA-204ENST00000577901 CMYA5Q8N3K9 4069 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 A6NLC8 198 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 FAM20BO75063 409 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 SRSF10O75494 262 aaKnown RBP13.37□□□□□ -0.27
VAPA-204ENST00000577901 RPP14O95059 124 aaKnown RBP13.37□□□□□ -0.27
VAPA-204ENST00000577901 ZNF12P17014 697 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 GABRB1P18505 474 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 RBMXP38159 391 aaKnown RBP13.37□□□□□ -0.27
VAPA-204ENST00000577901 MFGE8Q08431 387 aaPredicted RBP13.37□□□□□ -0.27
VAPA-204ENST00000577901 RIPPLY1Q0D2K3 151 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 LPCAT4Q643R3 524 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 SSX6Q7RTT6 188 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 FAM220AQ7Z4H9 259 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 THAP5Q7Z6K1 395 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 ELMOD2Q8IZ81 293 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 OR51E1Q8TCB6 317 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 PIGCQ92535 297 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 PPP1R14AQ96A00 147 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 FAM71F1Q96KD3 344 aaPredicted RBP13.37□□□□□ -0.27
VAPA-204ENST00000577901 C1orf147Q96MC9 270 aaPredicted RBP13.37□□□□□ -0.27
VAPA-204ENST00000577901 MRI1Q9BV20 369 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 RTL8AQ9BWD3 113 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 PATZ1Q9HBE1 687 aaKnown RBP13.37□□□□□ -0.27
VAPA-204ENST00000577901 TMEM165Q9HC07 324 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 C1orf123Q9NWV4 160 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 POLR3KQ9Y2Y1 108 aaPredicted RBP13.37□□□□□ -0.27
VAPA-204ENST00000577901 INSIG2Q9Y5U4 225 aa13.37□□□□□ -0.27
VAPA-204ENST00000577901 ZNF816-ZNF321PA0A0X1KG74 233 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 DAPL1A0PJW8 107 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 ZNF850A8MQ14 1090 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 ZNF205O95201 554 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 IGLV3-1P01715 115 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 TTRP02766 147 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 ACKR3P25106 362 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 SEC61A1P61619 476 aaKnown RBP13.36□□□□□ -0.27
VAPA-204ENST00000577901 PRDX4Q13162 271 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 KCNJ8Q15842 424 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 ZNF684Q5T5D7 378 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 KCTD20Q7Z5Y7 419 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 ZDHHC23Q8IYP9 409 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 OR1M1Q8NGA1 313 aa13.36□□□□□ -0.27
VAPA-204ENST00000577901 MRPL48Q96GC5 212 aaKnown RBP13.36□□□□□ -0.27
VAPA-204ENST00000577901 ZNF48Q96MX3 618 aaPredicted RBP13.36□□□□□ -0.27
VAPA-204ENST00000577901 UNKLQ9H9P5 680 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms