RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 ISXQ2M1V0 245 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 BATF2Q8N1L9 274 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 ST8SIA1Q92185 356 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 ZNF799Q96GE5 643 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR51B6Q9H340 312 aa11.75□□□□□ -0.53
PCDHGB3-201ENST00000576222 EIF1BO60739 113 aaKnown RBP11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 CTLA4P16410 223 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 TCTN1Q2MV58 587 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 ZNF66Q6ZN08 573 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 DBX2Q6ZNG2 339 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 GLRX5Q86SX6 157 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR4F5Q8NH21 305 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR4F4Q96R69 305 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 UBR3Q6ZT12 1888 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 LINC01553A4QN01 128 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 FMODQ06828 376 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 FUT5Q11128 374 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 ZAR1Q86SH2 424 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR51F2Q8NH61 342 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 RPS4Y2Q8TD47 263 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 SLC39A7Q92504 469 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 NTNG2Q96CW9 530 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 COX14Q96I36 57 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 ZNF845Q96IR2 970 aaPredicted RBP11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 RYDENQ9NUL5 291 aaKnown RBP11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 VSIG4Q9Y279 399 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 MRPS2Q9Y399 296 aaKnown RBP11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 IGHV3-20A0A0C4DH32 117 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 A0A1W2PPV9 198 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 KCNAB3O43448 404 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 TUSC2O75896 110 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 ENPP1P22413 925 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 APLNRP35414 380 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 SPANXN5Q5MJ07 72 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 ZNF383Q8NA42 475 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 KCNMB2Q9Y691 235 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 A0A1W2PNR3 127 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 FRG2CA6NGY1 282 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 SEMA7AO75326 666 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 RECKO95980 971 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 ADRA2AP08913 450 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 CTXN2P0C2S0 81 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 KITLGP21583 273 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 PNLIPRP2P54317 469 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 DHODHQ02127 395 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 FAM53BQ14153 422 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 CBLN3Q6UW01 205 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 MRGPREQ86SM8 312 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 ADAD2Q8NCV1 583 aaKnown RBP11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 BORCS7Q96B45 105 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 SCN3AQ9NY46 2000 aa11.74□□□□□ -0.53
PCDHGB3-201ENST00000576222 ARID2Q68CP9 1835 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 ECH1Q13011 328 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 SLC25A43Q8WUT9 341 aaPredicted RBP11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 TMEM37Q8WXS4 190 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 INTS12Q96CB8 462 aaKnown RBP11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 PARP11Q9NR21 331 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 FGF21Q9NSA1 209 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 FAHP16930 419 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 CD38P28907 300 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 Q3ZCU0 254 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 PABPC1L2AQ5JQF8 200 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 KIAA0895LQ68EN5 471 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 CPT1CQ8TCG5 803 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 TMEM68Q96MH6 324 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 HHIPQ96QV1 700 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 SOSTQ9BQB4 213 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 ZMIZ1Q9ULJ6 1067 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 ICAM5Q9UMF0 924 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 SLCO1B1Q9Y6L6 691 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 H3BP45 60 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 MRPS21P82921 87 aaKnown RBP11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 MESTQ5EB52 335 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 C9orf135Q5VTT2 229 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 ZNF439Q8NDP4 499 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 RGP1Q92546 391 aaPredicted RBP11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR51M1Q9H341 326 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 CES1P1Q9UKY3 287 aa11.73□□□□□ -0.53
PCDHGB3-201ENST00000576222 GGTLC2Q14390 218 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 ATRAIDQ6UW56 229 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 ASB5Q8WWX0 329 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 CDH20Q9HBT6 801 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 TMED3Q9Y3Q3 217 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 HS3ST3A1Q9Y663 406 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 ELOA3CA0A087WX78 387 aaPredicted RBP11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 RBFOX3A6NFN3 312 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 PIN1P1O15428 100 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 EIF3GO75821 320 aaKnown RBP eCLIP11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 ICAM2P13598 275 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 IQCJQ1A5X6 159 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 MS4A3Q96HJ5 214 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 PBX4Q9BYU1 374 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR2M5A3KFT3 312 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 H0YIG0 161 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 GPR37O15354 613 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR2J2O76002 312 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 PSG6Q00889 435 aa11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 MAML2Q8IZL2 1156 aaPredicted RBP11.72□□□□□ -0.53
PCDHGB3-201ENST00000576222 OR10J5Q8NHC4 309 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms