RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 IFNGR2P38484 337 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 PRKXP51817 358 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 DLX1P56177 255 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 FXYD6P3P58550 94 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 CSNK2BP67870 215 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 ELF3P78545 371 aaPredicted RBP7.29□□□□□ -1.24
SMG6-218ENST00000575454 FAM3AP98173 230 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 DGUOKQ16854 277 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 TIGD6Q17RP2 521 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 ARSJQ5FYB0 599 aaPredicted RBP7.29□□□□□ -1.24
SMG6-218ENST00000575454 HCP5Q6MZN7 132 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 SLC16A9Q7RTY1 509 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 WDR86Q86TI4 376 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 ZDHHC21Q8IVQ6 265 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 FAM185AQ8N0U4 392 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 PROKR2Q8NFJ6 384 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 OR5T2Q8NGG2 359 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 OR2T4Q8NH00 348 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 OR5K1Q8NHB7 308 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 FANK1Q8TC84 345 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 PIFOQ8TCI5 191 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 RPS4Y2Q8TD47 263 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 FOXRED1Q96CU9 486 aaPredicted RBP7.29□□□□□ -1.24
SMG6-218ENST00000575454 SEH1LQ96EE3 360 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 GAFA1Q96PS6 74 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 PAPOLGQ9BWT3 736 aaKnown RBP7.29□□□□□ -1.24
SMG6-218ENST00000575454 RGCCQ9H4X1 137 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 CENPMQ9NSP4 180 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 MRPL22Q9NWU5 206 aaKnown RBP7.29□□□□□ -1.24
SMG6-218ENST00000575454 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.29□□□□□ -1.24
SMG6-218ENST00000575454 NLKQ9UBE8 527 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 CD300AQ9UGN4 299 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 TCF19Q9Y242 345 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 N6AMT1Q9Y5N5 214 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 MPC1Q9Y5U8 109 aa7.29□□□□□ -1.24
SMG6-218ENST00000575454 OR6C68A6NDL8 312 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 OR2AT4A6NND4 320 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 ZNF878C9JN71 531 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 NDUFAB1O14561 156 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 TBX1O43435 398 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 SERPINA1P01009 418 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 SLC2A1P11166 492 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 SELLP14151 372 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 VDAC2P45880 294 aaPredicted RBP7.28□□□□□ -1.24
SMG6-218ENST00000575454 GABRA2P47869 451 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 GSK3AP49840 483 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 GRB2P62993 217 aaKnown RBP7.28□□□□□ -1.24
SMG6-218ENST00000575454 MXRA7P84157 204 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 CD83Q01151 205 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 KLHL22Q53GT1 634 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 DCXRQ7Z4W1 244 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 PIGWQ7Z7B1 504 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 FAM86B1Q8N7N1 296 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 SGK3Q96BR1 496 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 SLAMF6Q96DU3 332 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 REEP6Q96HR9 211 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 HIST1H2AAQ96QV6 131 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 OR52D1Q9H346 318 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 SNTG1Q9NSN8 517 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 INTS9Q9NV88 658 aaKnown RBP7.28□□□□□ -1.24
SMG6-218ENST00000575454 RHBDD3Q9Y3P4 386 aa7.28□□□□□ -1.24
SMG6-218ENST00000575454 TRBV4-1A0A0J9YWV2 114 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 LOC100653049A0A140TA62 436 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 WI2-2373I1.2A0A1W2PRP0 233 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 A6NDX4 124 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 FAM90A8PA6NJQ4 464 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 KRT34O76011 436 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 ANXA2P07355 339 aaKnown RBP7.27□□□□□ -1.25
SMG6-218ENST00000575454 HSD11B1P28845 292 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 FMO3P31513 532 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 MSX2P35548 267 aaPredicted RBP7.27□□□□□ -1.25
SMG6-218ENST00000575454 CAPZA1P52907 286 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 BLVRAP53004 296 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 ERVFRD-1P60508 538 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 GMFBP60983 142 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 LIPEQ05469 1076 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.27□□□□□ -1.25
SMG6-218ENST00000575454 EGFEM1PQ0D2K5 195 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 HABP2Q14520 560 aaPredicted RBP7.27□□□□□ -1.25
SMG6-218ENST00000575454 FAM76BQ5HYJ3 339 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 TEX30Q5JUR7 227 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 CCBE1Q6UXH8 406 aaPredicted RBP7.27□□□□□ -1.25
SMG6-218ENST00000575454 KCTD8Q6ZWB6 473 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 CALHM1Q8IU99 346 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 MKXQ8IYA7 352 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 SDR9C7Q8NEX9 313 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 TMEM185AQ8NFB2 350 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 OR5AU1Q8NGC0 362 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 FAM162AQ96A26 154 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 MALSU1Q96EH3 234 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 SDSLQ96GA7 329 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 OR5M11Q96RB7 305 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 HOPXQ9BPY8 73 aaPredicted RBP7.27□□□□□ -1.25
SMG6-218ENST00000575454 WDR13Q9H1Z4 485 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 OR10A2Q9H208 303 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 RASL12Q9NYN1 266 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 USE1Q9NZ43 259 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 NDUFAF4Q9P032 175 aa7.27□□□□□ -1.25
SMG6-218ENST00000575454 TBL2Q9Y4P3 447 aaKnown RBP7.27□□□□□ -1.25
SMG6-218ENST00000575454 TSSC4Q9Y5U2 329 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms